FMO10335.5prime Sequence
875 bp (875 high quality bases) assembled on 2010-11-12
> FMO10335.5prime
CAGTCGACATGCATGTTGAAAAGAAATCAGAGCTTCGTAGCCTACTAAAA
TCCGGGGACAAGCGTTGCAAACTCGTTGAGCCCAGGAACACCAAAAGCTG
CGTCTGGAGGTTTTTCAATCTCGTCCAGTGCGACGACCACATAGAGCCGT
ACGCCTGCTGCAAAACCTGTGGCGATCTGTTATCCTACAGCGGCAAAACT
GGAACCGGATCCCTGCTACGGCACCGATGTCTCCACTCCAGCAGCAGTAA
CGACAAAACCGTGCGGATTACCAAGGCCAAGACGCTGAGGGAGCCGCTGC
GTGTGGCCAAGCCGAAGATCGAGTCGAACGTCGCCAATTATCTGGGCGAG
GCGGGCGCCCTGCCGCAAAAGTGGGAGGAGTACGAGCAGAACGATGAGAT
TAGCGAGGACATTAAGGACATCATATACAGCGAGGATCCACTGTGCTATA
GTCCTATACACGTGATGGATGATGAGGGCCTGGATCAGCCTGAGAAGCAA
GTGACCGTGCTAACCCATTCGACTTCACCAGCCGGTGGAAGTAGCAGGCC
CATCGGTGTTGGTTCGGGCGTACAGGCTACTGTGGTGGCCTCCACGTCCT
CCAGCAGCAGCTCGGCCAAGCAGCTGAAGAACAACCTGGAGACGTCCATC
GAACGGCTGACCGCTGTCAGCGAACAGCTCAGCTACATCATACAACAGAA
TCACGAGGAGCTCACCAAGGACGACGACTACTATTTTGCACTTAGCTTGG
TGCCCGCAATGCGCCACCTTTCGCTCAGTCGGAAGATGTACGTGCGGTCC
AAGATCCAGGATATACTGTTCAAGGAAAGTGAGGACTCAACGCTTGCCAA
GGATGAGGCAAGCTTTCTAGACCAT
FMO10335.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:11:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| BEAF-32-RA | 1192 | CG10159-RA | 118..966 | 9..857 | 4245 | 100 | Plus |
| BEAF-32-RC | 1558 | CG10159-RC | 727..1332 | 252..857 | 3030 | 100 | Plus |
| BEAF-32-RB | 1173 | CG10159-RB | 342..947 | 252..857 | 3030 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:11:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14771799..14772404 | 252..857 | 3030 | 100 | Plus |
| 2R | 25286936 | 2R | 14770586..14770829 | 9..252 | 1220 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:11:18 has no hits.
FMO10335.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:16:12 Download gff for
FMO10335.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| BEAF-32-RA | 110..970 | 1..863 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:21:40 Download gff for
FMO10335.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| BEAF-32-RA | 111..971 | 1..863 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:50:39 Download gff for
FMO10335.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| BEAF-32-RA | 111..971 | 1..863 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:50:39 Download gff for
FMO10335.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14770579..14770829 | 1..252 | 98 | -> | Plus |
| 2R | 14771800..14772409 | 253..863 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:21:40 Download gff for
FMO10335.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10658084..10658334 | 1..252 | 98 | -> | Plus |
| arm_2R | 10659305..10659914 | 253..863 | 99 | | Plus |
