FMO10336.5prime Sequence
800 bp (800 high quality bases) assembled on 2010-11-12
> FMO10336.5prime
CAGTCGACATGGAACTGCGGAGCAAACATCGCATAATGGGTGCTCCAGTG
GGCACAGCGAACACAAAAGGCTGGAGTCCTAATCAATCCACTCTGCCCGT
GGAGCTCAGTAAATTTGAAACCCAATTGCTTTTGGATGAGAATATAGCAA
AGTTAGTTGATAAATCCAAAGATCTAAAGGCTAAACCCACTGCCGAGAAA
CTTGAGGAGTGCAAGGCGGATTTTGAATCCCGGTTACTGGGACAGGAGGA
AGCATTGAAAACGGAGAAACTACGGGAAACTGAACGATACATGGATAAGA
TTCTGACGGGAAAACGCAAGAAGTTGCTCAAGCAGGGCAAAAATGAATTG
GCTGCCGCTCTGACTGATAAGGATGTACTATTGGAGATGTCTGTGAATTT
CAAATTCGATCGCCAAAATGCCTTGCTGGAGGTGCATTGTGAACATCCCA
CGGATCACTCTGCGCAAATAGTTACCGGTCCCATTGTGCACACCAATTCC
CTGAAATACCGCGTTTTCAAAGATCTGTGGAGGCGCGGAAAGTACGTGAC
TTCCGGCGATGCATTTGGAGCGGACTTTCTGGTTTACCCCGGCGATCCCA
TGATCTACCACGCCTCCCACATTGTAATTTTGCACGAGCAACCTGTAATT
AAGCCCCTGGAACTGATAGCAAAAGTTCGTCTATCGGTAATTGTCAACAA
AAGCTGCGTTTTCGCCTACGAGATGGAAAATAATGAGGAAGAAATACATT
ACCAAACGGTCGCATGGTGCAATCTTGGAAAAGCAAGCTTTCTAGACCAT
FMO10336.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:11:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33260-RC | 902 | CG33260-RC | 65..840 | 7..782 | 3880 | 100 | Plus |
Trl-RF | 2613 | CG33261-RF | 1..406 | 377..782 | 2030 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:11:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 14760582..14760904 | 782..460 | 1615 | 100 | Minus |
3L | 28110227 | 3L | 14761292..14761552 | 351..91 | 1305 | 100 | Minus |
3L | 28110227 | 3L | 14760967..14761075 | 459..351 | 545 | 100 | Minus |
3L | 28110227 | 3L | 14761640..14761723 | 90..7 | 420 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 17:11:21 has no hits.
FMO10336.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:16:12 Download gff for
FMO10336.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33260-RB | 1..777 | 9..785 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:21:42 Download gff for
FMO10336.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33260-RC | 61..840 | 1..782 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:50:42 Download gff for
FMO10336.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33260-RC | 61..840 | 1..782 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:50:42 Download gff for
FMO10336.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 14760582..14760904 | 460..782 | 100 | <- | Minus |
3L | 14760967..14761074 | 352..459 | 100 | <- | Minus |
3L | 14761292..14761552 | 91..351 | 100 | <- | Minus |
3L | 14761640..14761729 | 1..90 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:21:42 Download gff for
FMO10336.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 14753682..14754004 | 460..782 | 100 | <- | Minus |
arm_3L | 14754067..14754174 | 352..459 | 100 | <- | Minus |
arm_3L | 14754392..14754652 | 91..351 | 100 | <- | Minus |
arm_3L | 14754740..14754829 | 1..90 | 96 | | Minus |