Clone FMO10337 Report

Search the DGRC for FMO10337

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:103
Well:37
Vector:pMK33-CFH-BD
Associated Gene/Transcriptmei-217-RC
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10337.5prime Sequence

863 bp (863 high quality bases) assembled on 2010-11-12

> FMO10337.5prime
CAGTCGACATGTTCACAGTGGATGCAAGCGAAGGATCATCAGTTGTAAAC
GAGACTCCATTAAAAAGCCAATTCCACGATCAGAAGTTGGTTGAGCACTT
TTGCCGGCAGACGCAGCTGCTCAAGCTGGTCCAGGTCTCCTCTGGCCGCT
TTGTGGCGAACTATATGAGCTCCCGGCGGCCAGAGGACCTGCTGGCCCCC
ATCCAGCTGCGCCTGGACTTCGAATACCGGCAACTACTCGATATCTCACC
GCAACTACTGCAGCTCATCGTCGAGGAACCGCTGCAGTTTCAAGAAGCGG
TCCGCTACTCGGTTTATGGCTTGATCCGCTCACATCTCAAGGACGCTGGC
CTGAAGCCCATCGATATCAACCAGCTGCACGCCCACTGGCGCCTGGTGGG
ACTGCCCTTTACGCCGGGCCTGCAGTTCGAGCCGCGGGACCAGTTGACCC
GGCTGGGCTTGTCCCAGATCCGGGGCATCCTAGCCGCTTTCACGCCGCAA
GAAACACTGGTCCTACAATCGATCTGGTACTGCGGCAGTGGCTGTATGCG
AAATGCCATACAGACCAGCTCAACAGATGCACCCTTTTGTTCGAGCTGCT
CGCGGCCCATGAGTGAATACCAAAAGCTGCGCGTCACGGAAACCTATCGT
ATCTTGGCTGTCTTGCCTATTTCGGCAGTTCAGACACCTCGTGTCACCAA
TTGCCTTCATCGCCCAAAATTAGTTCGCCTTAGAGCCCACGCCCACGACT
GCGAATTAAAGTTGGGTGCTAGCTACCTAATCACTGGATACTTTGCGAGC
TCAGCCAGCACATATCAACTGGAAGCATGTCATCTACGAATAAACGCAAG
CTTTCTAGACCAT

FMO10337.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:11:55
Subject Length Description Subject Range Query Range Score Percent Strand
mei-217-RC 5005 CG33935-RC 128..964 9..845 4185 100 Plus
mei-218-RC 5005 CG8923-RC 128..964 9..845 4185 100 Plus
mei-218-RD 6125 CG8923-RD 212..652 71..511 2205 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:11:53
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 17142267..17142707 511..71 2205 100 Minus
X 23542271 X 17141326..17141482 735..579 785 100 Minus
X 23542271 X 17141094..17141205 845..734 560 100 Minus
X 23542271 X 17141694..17141761 579..512 340 100 Minus
X 23542271 X 17142802..17142863 70..9 310 100 Minus
Blast to na_te.dros performed on 2014-11-26 17:11:54 has no hits.

FMO10337.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:16:18 Download gff for FMO10337.5prime
Subject Subject Range Query Range Percent Splice Strand
mei-217-RB 123..964 3..845 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:22:03 Download gff for FMO10337.5prime
Subject Subject Range Query Range Percent Splice Strand
mei-218-RC 123..964 3..845 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:50:59 Download gff for FMO10337.5prime
Subject Subject Range Query Range Percent Splice Strand
mei-218-RC 123..964 3..845 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:50:59 Download gff for FMO10337.5prime
Subject Subject Range Query Range Percent Splice Strand
X 17141094..17141203 736..845 100 <- Minus
X 17141326..17141481 580..735 100 <- Minus
X 17141694..17141761 512..579 100 <- Minus
X 17142267..17142707 71..511 100 <- Minus
X 17142802..17142868 3..70 95   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:22:03 Download gff for FMO10337.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 17035127..17035236 736..845 100 <- Minus
arm_X 17035359..17035514 580..735 100 <- Minus
arm_X 17035727..17035794 512..579 100 <- Minus
arm_X 17036300..17036740 71..511 100 <- Minus
arm_X 17036835..17036901 3..70 95   Minus