FMO10337.5prime Sequence
863 bp (863 high quality bases) assembled on 2010-11-12
> FMO10337.5prime
CAGTCGACATGTTCACAGTGGATGCAAGCGAAGGATCATCAGTTGTAAAC
GAGACTCCATTAAAAAGCCAATTCCACGATCAGAAGTTGGTTGAGCACTT
TTGCCGGCAGACGCAGCTGCTCAAGCTGGTCCAGGTCTCCTCTGGCCGCT
TTGTGGCGAACTATATGAGCTCCCGGCGGCCAGAGGACCTGCTGGCCCCC
ATCCAGCTGCGCCTGGACTTCGAATACCGGCAACTACTCGATATCTCACC
GCAACTACTGCAGCTCATCGTCGAGGAACCGCTGCAGTTTCAAGAAGCGG
TCCGCTACTCGGTTTATGGCTTGATCCGCTCACATCTCAAGGACGCTGGC
CTGAAGCCCATCGATATCAACCAGCTGCACGCCCACTGGCGCCTGGTGGG
ACTGCCCTTTACGCCGGGCCTGCAGTTCGAGCCGCGGGACCAGTTGACCC
GGCTGGGCTTGTCCCAGATCCGGGGCATCCTAGCCGCTTTCACGCCGCAA
GAAACACTGGTCCTACAATCGATCTGGTACTGCGGCAGTGGCTGTATGCG
AAATGCCATACAGACCAGCTCAACAGATGCACCCTTTTGTTCGAGCTGCT
CGCGGCCCATGAGTGAATACCAAAAGCTGCGCGTCACGGAAACCTATCGT
ATCTTGGCTGTCTTGCCTATTTCGGCAGTTCAGACACCTCGTGTCACCAA
TTGCCTTCATCGCCCAAAATTAGTTCGCCTTAGAGCCCACGCCCACGACT
GCGAATTAAAGTTGGGTGCTAGCTACCTAATCACTGGATACTTTGCGAGC
TCAGCCAGCACATATCAACTGGAAGCATGTCATCTACGAATAAACGCAAG
CTTTCTAGACCAT
FMO10337.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:11:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mei-217-RC | 5005 | CG33935-RC | 128..964 | 9..845 | 4185 | 100 | Plus |
mei-218-RC | 5005 | CG8923-RC | 128..964 | 9..845 | 4185 | 100 | Plus |
mei-218-RD | 6125 | CG8923-RD | 212..652 | 71..511 | 2205 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:11:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 17142267..17142707 | 511..71 | 2205 | 100 | Minus |
X | 23542271 | X | 17141326..17141482 | 735..579 | 785 | 100 | Minus |
X | 23542271 | X | 17141094..17141205 | 845..734 | 560 | 100 | Minus |
X | 23542271 | X | 17141694..17141761 | 579..512 | 340 | 100 | Minus |
X | 23542271 | X | 17142802..17142863 | 70..9 | 310 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 17:11:54 has no hits.
FMO10337.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:16:18 Download gff for
FMO10337.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mei-217-RB | 123..964 | 3..845 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:22:03 Download gff for
FMO10337.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mei-218-RC | 123..964 | 3..845 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:50:59 Download gff for
FMO10337.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mei-218-RC | 123..964 | 3..845 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:50:59 Download gff for
FMO10337.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 17141094..17141203 | 736..845 | 100 | <- | Minus |
X | 17141326..17141481 | 580..735 | 100 | <- | Minus |
X | 17141694..17141761 | 512..579 | 100 | <- | Minus |
X | 17142267..17142707 | 71..511 | 100 | <- | Minus |
X | 17142802..17142868 | 3..70 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:22:03 Download gff for
FMO10337.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 17035127..17035236 | 736..845 | 100 | <- | Minus |
arm_X | 17035359..17035514 | 580..735 | 100 | <- | Minus |
arm_X | 17035727..17035794 | 512..579 | 100 | <- | Minus |
arm_X | 17036300..17036740 | 71..511 | 100 | <- | Minus |
arm_X | 17036835..17036901 | 3..70 | 95 | | Minus |