FMO10339.5prime Sequence
884 bp (884 high quality bases) assembled on 2010-11-12
> FMO10339.5prime
CAGTCGACATGAACCTCGAGCAGCAGGGGATGGATCCGCAAGGGGTGGAA
AACCAGCAGGAAATCGTCCAGGCAGCCGAAGGAGAACAGCAGTTGCAAAG
TTGCTGTAAGGTCTTCAAAATGAAGGGATCGACGCTGGACAAAATCTCCG
CCTTCCTCGGCGAGCTCATCGGCACCGGCATCCTGGTCTTCCTGGGCTGC
ATGGGTTGCGTGAAGACGGACCTCTTTCCCAACAACCATCTGCAGATTGT
GCTGAACTTCGGCTTCGCCGTCCTCATCGCCATCCAGTGCTTTGGCTGCG
TCTCCGGTGCCCATCTGAATCCCGCCGTGACCGTGGCCGCCTACATCTAC
GAGATGGTCACCCTGCGCATGGCATTTGCCTACTTCGCCGCCCAGATGCT
GGGCGCCTTCATCGGCTACGGCCTGCTCATGGTCCTGCTTCCCTCGCCCA
CACTTACGGTGGGCGCTGGGCTCTGCGTGACCTTGCCCCACACCAGCGTA
ACCACGGGCCAGGCCCTCGGCATCGAGTTCGTAATCACCTCCATCCTGGT
CATCGTCTGCTGCGGAGTGTGGGATCCGCGCAACTCCAAGTTCCATGACT
CCGTGGGCATTCGATTTGGCCTGGCCATCGCCTGTCTCGCCTGCGCTGCC
GGTCCCTTCACCGGCGGCAGCATGAACCCGGCCAGGTCGTTCGCCCCCGC
CCTGTGGAACAAGCACTTCGAGAGCAACTGGATCTACTGGCTGGCCCCGC
TGAGCTCCTCCGCCATCACCGCCTACGCCTACAAGGTCGTCTTCCGCCGC
GAGGTGGTTGAGGCGGAGATCACCTCCAATGAGAAGCTGCGGCAACTGGA
GGACGTCCAGCTGTCGGCAAGCTTTCTAGACCAT
FMO10339.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:12:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4019-RE | 1183 | CG4019-RE | 82..939 | 9..866 | 4290 | 100 | Plus |
CG4019-RF | 1271 | CG4019-RF | 260..1027 | 99..866 | 3840 | 100 | Plus |
CG4019-RD | 1128 | CG4019-RD | 117..884 | 99..866 | 3840 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:12:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 23608131..23608683 | 651..99 | 2765 | 100 | Minus |
2R | 25286936 | 2R | 23607836..23608051 | 866..651 | 1080 | 100 | Minus |
2R | 25286936 | 2R | 23608931..23609022 | 100..9 | 460 | 100 | Minus |
2R | 25286936 | 2R | 23604625..23604800 | 427..252 | 400 | 81.8 | Minus |
2R | 25286936 | 2R | 23606358..23606443 | 342..257 | 205 | 82.6 | Minus |
Blast to na_te.dros performed 2014-11-26 17:12:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
diver2 | 4917 | diver2 DIVER2 4917bp | 4100..4150 | 874..822 | 116 | 71.7 | Minus |
FMO10339.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:16:19 Download gff for
FMO10339.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4019-RD | 78..849 | 99..871 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:22:07 Download gff for
FMO10339.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4019-RE | 75..943 | 1..871 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:51:01 Download gff for
FMO10339.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4019-RE | 75..943 | 1..871 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:51:01 Download gff for
FMO10339.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23608132..23608681 | 101..650 | 100 | <- | Minus |
2R | 23608931..23609027 | 1..100 | 97 | | Minus |
2R | 23607832..23608051 | 651..871 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:22:07 Download gff for
FMO10339.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19495355..19495574 | 651..871 | 99 | <- | Minus |
arm_2R | 19495655..19496204 | 101..650 | 100 | <- | Minus |
arm_2R | 19496454..19496550 | 1..100 | 97 | | Minus |