FMO10342.5prime Sequence
1106 bp (1002 high quality bases) assembled on 2010-11-12
> FMO10342.5prime
CAGTCGACATGAGTCCGCCCCAACTTTTGAGCAAGGACTCCCCAGATATT
GAGGACCTGCTGTCGCTAAATCCGCGAGTGAAGACGCAGTGCTCCGTGGT
GCCCACCAAGCAGACGAAGGAGAACAAGAAGCACTGGAAACGCAATGCGG
ATCACGCTGCTCCGCCGTGCACCACGCTGGCCAACGACTTCTCGGACATC
AAGCACACCACATTGTCGGAGCGCGGAGCTCTAGAGGAGGCGGCCAGGTG
CCTCAAATGCGCCGATGCTCCGTGCCAAAAGTCCTGTCCCACGCAGCTGG
ACATCAAGAGCTTCATTACGAGCATTGCGAATAAGAATTTCTATGGCGCC
GCCAAGGCGATCTTCTCCGACAATCCGCTGGGTCTGACCTGCGGCATGGT
CTGTCCCACCAGCGATCTCTGCGTGGGCGGTTGCAATCTGCAGGCCTCCG
AGGCGGGACCGATTAACATTGGTGGCCTCCAGCAGTTCGCCACCGAGGTG
TTCAAGAAGATGGGCGTGCGGCAGCGGAGGACACCGCAGGCGGAGGCCAA
TCCGCTGTCGCAAAAGATCGCCCTCGTGGGCGGCGGACCGGCATCGCTGT
CGTGCGCCACCTTCCTGGCCCGTCTGGGCTATCGGGATGTGACCATCTAC
GAGCGGAGAAGCTATCTGGGTGGCCTGAGTGCCGCTGAAATTCCCCAGTA
TCGTCTGCCCATCGATGCGGTTAACTTTGAGATCGATTTGGTTCGCGATC
TGGGCGTACGCATCGAAACGGGTCGCTCGCTGGGCACCAAGGATTTGACC
ATCCAGGGACTCCTGTCCACCGGCCATGATGCCGTCTTTGTGGGCATTGG
CCTGCCGGACCGAAGCTGATCCCATTTTCGCTGGGCTTCAGCCCAGCAAT
GGTTTCTACACCTCGAAAACTTCCTGCCCTGTGTCGGATGGCTCGAACCG
GGTTTGTGCGCTGCAAGCAGCGGCCGTTACCAAGCTCCATGCATGTCATC
GTTGGGTGCCGGTGATACGCTTCGAATGCCCCTCGGCCTGAAATGTGGTG
CTAGCCTGGTTCGTCGTCTCCGCAGATCTCGGCATCGTCCTGGCGAAAAG
TGACTG
FMO10342.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:09:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
su(r)-RC | 3399 | CG2194-RC | 221..1310 | 9..1074 | 4835 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:09:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 9199160..9200075 | 961..52 | 4300 | 99.2 | Minus |
X | 23542271 | X | 9200132..9200177 | 54..9 | 230 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 17:09:07 has no hits.
FMO10342.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:15:48 Download gff for
FMO10342.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
su(r)-RC | 210..1306 | 1..1074 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:20:06 Download gff for
FMO10342.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
su(r)-RC | 210..1306 | 1..1074 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:49:18 Download gff for
FMO10342.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
su(r)-RC | 214..1310 | 1..1074 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:49:18 Download gff for
FMO10342.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 9199029..9200073 | 54..1074 | 97 | <- | Minus |
X | 9200133..9200184 | 1..53 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:20:06 Download gff for
FMO10342.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 9093062..9094106 | 54..1074 | 97 | <- | Minus |
arm_X | 9094166..9094217 | 1..53 | 94 | | Minus |