Clone FMO10347 Report

Search the DGRC for FMO10347

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:103
Well:47
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG13877-RC
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10347.5prime Sequence

347 bp (347 high quality bases) assembled on 2010-11-12

> FMO10347.5prime
CAGTCGACATGGTTTACATATGCACTCTTGTGGTGTTGATCTTTCCCGTC
TTGTTGTTGGGTGCACCATGGGAAGGGTCGCATCCTAAGTCTCAGGTGGA
ATACATCAGCAACGACAAGAGAGTTGATTCTGGCTTCGCCAACCCCAATA
TCGTGCCCATCACCCAGCCGTCGGTCGTAACGCAAACAGCTCCTCCTCCG
CCGCCAAATTCCAAAAACTTTGCATATAGTCCGATGACGCAGAGCTGGAC
CCTCATTGCGCCAGGCGATCCGCTGCCCAATAATGACACCCTCGTCTGGA
ACCAGAGCAATGACAAATGGCTCACTCGCGCAAGCTTTCTAGACCAT

FMO10347.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:11:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG13877-RC 416 CG13877-RC 20..340 9..329 1605 100 Plus
CG13877-RB 507 CG13877-RB 113..436 9..329 1565 99.1 Plus
pyx-RB 2502 CG17142-RB 1947..2251 329..25 1525 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:11:47
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 218283..218587 25..329 1525 100 Plus
Blast to na_te.dros performed on 2014-11-26 17:11:48 has no hits.

FMO10347.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:16:17 Download gff for FMO10347.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13877-RA 109..437 2..333 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:22:00 Download gff for FMO10347.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13877-RC 15..345 2..335 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:50:56 Download gff for FMO10347.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13877-RC 15..345 2..335 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:50:56 Download gff for FMO10347.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 218283..218592 25..335 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:22:00 Download gff for FMO10347.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 218283..218592 25..335 99   Plus