Clone FMO10348 Report

Search the DGRC for FMO10348

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:103
Well:48
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG42371-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10348.5prime Sequence

287 bp (287 high quality bases) assembled on 2010-11-12

> FMO10348.5prime
CAGTCGACATGCTGCGCAAAACACCAAAACCTGCAATTTGGAAATTCATC
AAAGGAAGTGCCAAAACACTGTTTGTCCTCGAGGCAGTCTGCTTCGCAGC
CAGCTACGGCGTTTATTATCGCATGAACACGAATCGAGAGTTTCGTCAGC
ATATTCACGAGAACTATCCCTTCGTTTTGGACTATTACTACAAAATTGGT
GAAATCGTCGGAGACAGCACAGTGCGACAGGCGGATGCGAGTTATTGGAG
TGCTTTGAAGAAAAGCGACGCAAGCTTTCTAGACCAT

FMO10348.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:11:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG42371-RA 691 CG42371-RA 105..365 9..269 1305 100 Plus
CG15386-RA 691 CG15386-RA 105..365 9..269 1305 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:11:50
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2216829..2216961 269..137 665 100 Minus
2L 23513712 2L 2217013..2217142 138..9 650 100 Minus
Blast to na_te.dros performed on 2014-11-26 17:11:51 has no hits.

FMO10348.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:16:18 Download gff for FMO10348.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42371-RA 82..350 1..269 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:22:01 Download gff for FMO10348.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15386-RA 97..365 1..269 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:50:58 Download gff for FMO10348.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15386-RA 97..365 1..269 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:50:58 Download gff for FMO10348.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 2216829..2216959 139..269 100 <- Minus
2L 2217013..2217150 1..138 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:22:01 Download gff for FMO10348.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 2216829..2216959 139..269 100 <- Minus
arm_2L 2217013..2217150 1..138 97   Minus