FMO10349.5prime Sequence
770 bp (770 high quality bases) assembled on 2010-11-12
> FMO10349.5prime
CAGTCGACATGTCGACAGTCGATAAGGAAGAGCTGGTCCAGAAGGCTAAA
CTGGCCGAGCAGTCAGAACGTTACGATGATATGGCCCAGGCCATGAAGTC
CGTCACAGAGACTGGCGTTGAGCTCTCAAATGAGGAAAGAAATCTGCTCT
CCGTTGCCTACAAAAATGTGGTCGGTGCCCGCAGGTCATCGTGGCGTGTC
ATCTCCTCCATTGAGCAGAAAACCGAAGCATCCGCTAGAAAACAGCAGCT
CGCCCGTGAGTACAGAGAGCGTGTGGAGAAGGAGCTGAGGGAAATCTGCT
ACGAAGTTTTGGGACTTCTGGACAAATACCTTATTCCAAAAGCCAGCAAT
CCCGAGAGCAAGGTGTTTTACCTGAAGATGAAGGGTGATTACTACAGGTA
TTTAGCCGAGGTTGCCACAGGAGATGCACGCAACACCGTCGTTGATGACT
CGAAAAATGCCTATCAGGAGGCGTTCGATATTGCAAAAACCAAAATGCAG
CCCACGCATCCCATCCGTTTGGGTCTGGCCCTTAACTTCTCAGTCTTCTA
CTATGAGATTTTGAACTCACCAGACAAAGCTTGCCAATTGGCTAAACAGG
CGTTCGATGATGCGATAGCCGAGCTGGACACACTGAACGAGGACTCCTAC
AAGGACTCGACACTCATCATGCAGCTGTTGAGGGACAACCTGACTCTCTG
GACGTCCGACACCCAAGGCGACGAAGCTGAGCCACAGGAGGGCGGCGACA
ACGCAAGCTTTCTAGACCAT
FMO10349.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:09:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 14-3-3zeta-RI | 974 | CG17870-RI | 155..898 | 9..752 | 3690 | 99.7 | Plus |
| 14-3-3zeta-RA | 1753 | CG17870-RA | 155..898 | 9..752 | 3690 | 99.7 | Plus |
| 14-3-3zeta-RG | 3046 | CG17870-RG | 235..978 | 9..752 | 3690 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:09:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10106289..10106453 | 436..600 | 795 | 98.8 | Plus |
| 2R | 25286936 | 2R | 10107464..10107619 | 597..752 | 780 | 100 | Plus |
| 2R | 25286936 | 2R | 10104938..10105068 | 182..312 | 655 | 100 | Plus |
| 2R | 25286936 | 2R | 10105701..10105825 | 311..435 | 625 | 100 | Plus |
| 2R | 25286936 | 2R | 10104716..10104832 | 70..186 | 585 | 100 | Plus |
| 2R | 25286936 | 2R | 10105941..10106105 | 436..600 | 525 | 87.9 | Plus |
| 2R | 25286936 | 2R | 10106634..10106798 | 436..600 | 450 | 84.8 | Plus |
| 3R | 32079331 | 3R | 18247974..18248137 | 546..709 | 355 | 81.1 | Plus |
| 2R | 25286936 | 2R | 10104348..10104409 | 9..70 | 310 | 100 | Plus |
Blast to na_te.dros performed 2014-11-26 17:09:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dnet\R1B | 2038 | Dnet\R1B NETR1B 2038bp | 1212..1273 | 352..291 | 112 | 64.5 | Minus |
FMO10349.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:15:52 Download gff for
FMO10349.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 14-3-3zeta-RG | 231..985 | 1..756 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:20:22 Download gff for
FMO10349.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 14-3-3zeta-RG | 227..981 | 1..756 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:49:34 Download gff for
FMO10349.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 14-3-3zeta-RG | 227..981 | 1..756 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:49:34 Download gff for
FMO10349.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10104340..10104409 | 1..70 | 94 | -> | Plus |
| 2R | 10104717..10104830 | 71..184 | 100 | -> | Plus |
| 2R | 10104941..10105067 | 185..311 | 100 | -> | Plus |
| 2R | 10105702..10105825 | 312..435 | 100 | -> | Plus |
| 2R | 10106289..10106452 | 436..599 | 98 | -> | Plus |
| 2R | 10107467..10107622 | 600..756 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:20:22 Download gff for
FMO10349.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5991845..5991914 | 1..70 | 94 | -> | Plus |
| arm_2R | 5992222..5992335 | 71..184 | 100 | -> | Plus |
| arm_2R | 5992446..5992572 | 185..311 | 100 | -> | Plus |
| arm_2R | 5993207..5993330 | 312..435 | 100 | -> | Plus |
| arm_2R | 5993794..5993957 | 436..599 | 98 | -> | Plus |
| arm_2R | 5994972..5995127 | 600..756 | 98 | | Plus |
