FMO10358.5prime Sequence
1150 bp (977 high quality bases) assembled on 2010-11-12
> FMO10358.5prime
CAGTCGACATGGAAGGAGGCACTTTCAATCTGATGAAAACAGAATCCATT
CCCAGCTGCCTGCTTCAGCCCATCCGGGCGGTCCCCAAGTGCGTCAACTC
AAAGGAGATCCTAAGCAGTTTGGCGCGGAATCCGCGAAAGAGCCGCCTAT
ATCCTCCCCATGGCGGTCACATGCGGTCCGTTGTGGGAACCTTCTACAAG
ATCACGGACCAAATCGGTGAAATTGCGATAGGCACCAAGTTAACCGGCAC
CGTGCTGCTCGAGAGCCTGCCGGTCTTCTACGTGACCATCAATGGACCGG
GCTCCAAGCTTTTGAAATGTCTAGCCATGGGGCAGGTGCAACTGCAGGAA
CTGGAGCAGCTGCCCGACTATGGCGAAATCTTTGCATTCTACGACAAGGC
CGAGAATCGCATCTCTCGCATCGCCATTAATGCCCCCGTTCACCCCATGG
GCTACTGTGCCTATATGATCGACGCTGCCAAATATACCAACATGTCCGGC
ATGGAGCGCATCTTCGCGCTGCCGGATGATCTCAAGAAGCTGCCGGCGCT
AACGATCAAATGCCGCCTGGTCAATGTGGCCCAGATGCATATATTTATTA
CCCAAAATGTTAGACTGCGCGTCCTCGGCAGTAATGGCCTTGAACTGTTG
GTGGCCCTGATCAGGAATAGGACCAACATTCGGAAGATTCCATCCGCACA
ACTACCACCAATTTCGGGCGATGAGTACGGAAATATGGATGCAAACGAAC
AGGAAGTGGCCAAATCTTTTGCACGATATAGACCCAAGCGTCGCGACGTG
GTAGCATTGTACGCGTCCATGTCACAGGATCGTTAGCCATGCCGAATTCT
ACGCCGATTCGCTGATGGACCACAGTGCCCACGTGGAGCAAGAGTGTTAT
GAAAAGGGGCACATGTGATTTTCGCGTCCTGGGACATCGTTCTGGCCCCA
TATCAGGGCGATATCATCGCGCAAAATCGTGGACATATTTTCGCTGCCGT
TACCGTTGTCTACCTTTCTGGACTTCGGCATCACGAGTATACAGGCAAGA
AAATCTTAACATTTTGCTATGGAGCTGGAGAAAGTCCAGCCCAATCTGCT
TGAATTTGAATTATTGGAACCCGCCGTCAGGTGTTCCATACTTTACATAA
FMO10358.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:09:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15042-RA | 1405 | CG15042-RA | 13..1159 | 9..1150 | 5125 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:09:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18527163..18528254 | 1098..9 | 4735 | 98 | Minus |
Blast to na_te.dros performed on 2014-11-26 17:09:22 has no hits.
FMO10358.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:15:51 Download gff for
FMO10358.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15042-RA | 1..1107 | 9..1110 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:20:15 Download gff for
FMO10358.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15042-RA | 13..1119 | 9..1110 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:49:26 Download gff for
FMO10358.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15042-RA | 13..1119 | 9..1110 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:49:26 Download gff for
FMO10358.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18527108..18528254 | 9..1150 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:20:15 Download gff for
FMO10358.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18421141..18422287 | 9..1150 | 97 | | Minus |
