FMO10360.5prime Sequence
1122 bp (1026 high quality bases) assembled on 2010-11-12
> FMO10360.5prime
CAGTCGACATGGAGCGACAGAGGCGGCAGGAGATGGAACTACGTCTCCAG
CAACAGCGAGAGCAGGCTGCCCAAGTCAATAACTTTATACACGCTCCCCA
GTCTGTCTTTCGACCCATTGAAAATGAAACGCAACCGCAACCGGGTATTT
ACAAGCCCATAGCTCATAAATCTCAACCCAATCCAGCCGTTTGGAAACCA
CCAACGCAGCAATCACAACCACCGCAGCAATCGCAGCAACATTTGCAACC
GAGATCGGCTACTACATATAGCAATACCCCCTCGCCATCCTCAACGGCCA
CCTCACCCATCGGATTGCCCTGGGTGGCAAAACCGAAGGTGGACAATAGC
GATTTTCGACGCAAAGCGCACCACTTTGAAGAGAGGTCCTTGAGGGATAA
CATCGAACAACAGCAACAGCCAACGTATCCCAATGGCAACAATGGTTATT
TGCAGCGTCACAATTCCCTGCGCTCGAAAGCACCAGCATTGAGTGAGTTT
AAGAAGAGGCCATCCTTGCCGAATGCCATGGACCCGGGAACAGCTGCACC
ACCGCGACAGGTGTATCAAGCTCCACCGCCACCCACGAATATCTCATTTA
CGTACGCCGATTTCCCGCCAGTTCGACGTCCACAAGGTGCTAGTGCTCAC
AACTACAGGAGTCAACCTTGCCTAACAAGTGCTGTGGATCAGGTCGAGGC
ATTGACCAATCCCCTGGGTGCACCTCTAGTGCTCACAAGCTCAAATCCCA
CTTATCTGCCGCCACCTGGAAGCAGAAGATTCGACTACATCAGCAGTCCA
GTCGATGTGGATGCGGATAGTCCACCTAATAGTCCCACGAGCTTCATGAC
CATGCCCAATCCCACTTTGATGACGGACATACGGACGATGATCTCGATTT
GGATTCGGATACATATGCTGGAGTACCGGGCCGAAACAAAGGTGATGCGA
AGCCACCGCAGCCAAACGGCAGTAGGTGGCGACAGAAGAAACGCTCACAT
GAGTGACGATGAGTCTTTTGGAAAGAACTCAAGGGCAGCAGTTCTTGCTC
TACACGATGAAGCAGCTAGGAGGTGTCTTGGCATGCCCTCAGTTGGCATA
GCGGCCAAGAAGCCACCACTTA
FMO10360.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:09:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34417-RU | 17577 | CG34417-RU | 12449..13557 | 9..1107 | 5135 | 98.3 | Plus |
| CG34417-RT | 16863 | CG34417-RT | 12449..13557 | 9..1107 | 5135 | 98.3 | Plus |
| CG34417-RR | 16701 | CG34417-RR | 12449..13557 | 9..1107 | 5135 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:09:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6580292..6581390 | 9..1098 | 4940 | 97.9 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:09:27 has no hits.
FMO10360.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:15:52 Download gff for
FMO10360.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34417-RH | 12429..13561 | 1..1120 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:20:19 Download gff for
FMO10360.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34417-RR | 12440..13572 | 1..1120 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:49:32 Download gff for
FMO10360.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34417-RR | 12440..13572 | 1..1120 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:49:32 Download gff for
FMO10360.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6580283..6581415 | 1..1120 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:20:19 Download gff for
FMO10360.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6474316..6475448 | 1..1120 | 97 | | Plus |
