Clone FMO10363 Report

Search the DGRC for FMO10363

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:103
Well:63
Vector:pMK33-CFH-BD
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10363.5prime Sequence

1140 bp (1038 high quality bases) assembled on 2010-11-12

> FMO10363.5prime
CAGTCGACATGCACTGCGCTTTGTATAACTCGTGTCCGGTGGCACACAAA
CATCTGCCCACCCTGGACATTGAACCCAGTGACTATGTGCATGAAGTTCC
ACCTCCTGGCGAAATCGTGCGTCCTCCAATACAGTTGGGAGAGACATACT
ACGCTGTTAAGAACAAGGCTATTGCCAGCTGGGTGTCCATAAAGGTAATC
GAGTTTACAGAGAGCACCGCCATCAACGGAAACACGATGAAGAGCTACAA
GATTAGGTACCTCAACACTCCGTACCAGATGATCAAGACAGTGACGGCCA
AGCACATTGCCTACTTCGAACCACCGCCAGTGCGACTGACCATTGGTACC
CGCGTGATTGCGTACTTCGATGGCACCACTTTGTCGCGGGGCAAGGATAA
GGGCGTGGTGCAGAGCGCCTTTTATCCAGGCATCATCGCTGAGCCGTTGA
AGCAGGCCAATCGCTACCGCTACCTAATATTCTACGACGATGGGTACACT
CAGTACGTTCCGCACCGCGATGTCCGTCTAGTTTGCCAGGCTTCCGAGAA
AGTGTGGGAGGACGTACACGCCGCATCGCGCGATTTCATACAGAAGTACG
TGGAGAAGTACTCCGTGGATCGTCCCATGGTGCAATGCACCCGGGGACAA
AGTATGACCACTGAATCGAACGGGACCTGGCTGTACGCGCGCGTCATTGA
CATCGACTGCAGCTTGGTGTTGATGCAGTTTGAGGGCGACAAAAACCATA
CGGAGTGGATATACAGGGGTTCATTGCGCTTGGGTCCTGTCTTCAGGGAA
ACCCAGAACAATATGAACAGTTCAAGCGCACAGCAGCTGCGTGTCCCAAG
ACGCACGGAGCCCTTTATTCGGTACACCAAGGAGATGGAGTCCAGCAGCA
AGGTGACCAGCAGATGCGTGCCTTTGCCCGCAGAGCAGCGCCTCCGCCCA
AAATAACGCATTAGCGGCTGCATCTTCGGCAGCACCCCAGCCGGAGGACG
CACAATGCAAGGAGGTGTTCAGCACAGTAATAGCGCAGGTGCTGGTGCGA
CACCTTAAACAACTCGAACAATCTTACGTGACGAACGAGAAATGGCCAGG
CCCATGTTAGCCTACTTACGCAAGCGAAATCCTGCCTCCA

FMO10363.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:10:00
Subject Length Description Subject Range Query Range Score Percent Strand
egg-RA 3937 CG12196-RA 1349..2481 9..1139 5115 97.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:09:59
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 24777467..24777973 851..345 2520 99.8 Minus
2R 25286936 2R 24778033..24778291 347..89 1295 100 Minus
2R 25286936 2R 24777192..24777408 1067..852 665 92.2 Minus
2R 25286936 2R 24778344..24778424 89..9 405 100 Minus
Blast to na_te.dros performed on 2014-11-26 17:09:59 has no hits.

FMO10363.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:15:57 Download gff for FMO10363.5prime
Subject Subject Range Query Range Percent Splice Strand
egg-RA 1354..2449 1..1097 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:20:46 Download gff for FMO10363.5prime
Subject Subject Range Query Range Percent Splice Strand
egg-RA 1341..2436 1..1097 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:49:50 Download gff for FMO10363.5prime
Subject Subject Range Query Range Percent Splice Strand
egg-RA 1341..2436 1..1097 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:49:50 Download gff for FMO10363.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 24777164..24777408 852..1097 93 <- Minus
2R 24777467..24777972 346..851 99 <- Minus
2R 24778035..24778290 90..345 100 <- Minus
2R 24778344..24778432 1..89 95   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:20:46 Download gff for FMO10363.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 20664687..20664931 852..1097 93 <- Minus
arm_2R 20664990..20665495 346..851 99 <- Minus
arm_2R 20665558..20665813 90..345 100 <- Minus
arm_2R 20665867..20665955 1..89 95   Minus