FMO10366.5prime Sequence
1159 bp (1023 high quality bases) assembled on 2010-11-12
> FMO10366.5prime
CAGTCGACATGGATTCGGCACTATTAAAATCACCAAGCGACTCCACACCG
TCAGCTGGACTTTTTGGAAAATTCGATGGCTTCACTCTGCGACCGCTGAA
CGATGCATCTTCACCAGCGAGCAACTACAACGGACCAAATGTGGCCTTTG
TTCAACCCACTGTGCAGCAGGATGGACCGCAGCGAATGGCCCCACCACCC
CCAGTAGTAAAACCAGGAACGGCTCCCATTCATCCCCCATCCCCGAAACC
AGAAGCTACTTGGGTGAGGCCAGCGCCCGCTTTGCCACCACCCAATCCTG
GCTCAACGGCACGTCCCATTATCTCACCACCCAAACTGGATTCTAGTACA
TTAACTATGGTACCACTCAAGGACAGCACAGAGGATCTCTCGCCCAGTCG
ATCTGCTCCTCCAGTTCCTCTACACGCTGATCCCAAGCTAAATGTTAAAC
GAGATGGTACCATTCGTCGATTTGCTTCGTTTCTGAAAAAGGAAGAGAAA
CCGCCACTAAAAGAGAAGACCTACATCGATCGGGAGCGGCTGCGAACTCT
GGAAATTTCTGCCCCTATGCCTGTGCCCGCTGCTCCCCAAGCTGAATCAT
CCAATTCCGATTCGGAGACCACTCCACGCGAAGAGGAAACCCAGAATCTG
GTAAAACGCGCACAATCCATGCGTTCGCCCACCAAAAAGGCTCCACTCCA
GAGTTTTGGATCCATGCGTTCTCCACCGGGACTGCCACGGCCGAAGAGTG
GTCAGGTGAATAGCAATGGCGCCTCGAGACCAAAGTCGCCACCTCCAACG
CCACCGCCAGTGGTGGTCAAGAAAACAAACTCCATCAGTTCATCGGGCTA
TCAGCGGGCCGGTTTCCACTGCCCAGAGATCTGTGGAGAATACCTATGAC
GATTGCGAATTTGTGGAGAATGAAGTGCGAGCCTCGAACGACGACATTTA
CTCCGTAATTGATGAGATTCCGCCAGCGGCACAGACCCTCAAGCGGAGCG
ATTTGGTGTCAACAGGGCGAGTATGCAGCGATTATGGGTTTGCTAATGAA
ATATGAATGACTTAAAAAAGAATCACCGGGATTCATATCCTCAGAAGGCC
GGTGCTGCAGCAGCATCAGCGAGCTCACCAAAACCCCGAGAATTCCAAGT
TCCCAGGAA
FMO10366.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:07:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Meltrin-RC | 5841 | CG7649-RC | 3205..4338 | 9..1136 | 5170 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:07:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 14666426..14667543 | 1120..9 | 4945 | 97.8 | Minus |
Blast to na_te.dros performed 2014-11-26 17:07:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| BS3 | 1790 | BS3 BS3 1790bp | 1529..1570 | 660..702 | 122 | 79.1 | Plus |
FMO10366.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:15:30 Download gff for
FMO10366.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Neu3-RB | 3240..4386 | 1..1141 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:19:02 Download gff for
FMO10366.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Meltrin-RC | 3240..4386 | 1..1141 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:48:21 Download gff for
FMO10366.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Meltrin-RC | 3197..4343 | 1..1141 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:48:21 Download gff for
FMO10366.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 14666405..14667548 | 1..1141 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:19:02 Download gff for
FMO10366.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 10492127..10493270 | 1..1141 | 97 | | Minus |
