FMO10369.5prime Sequence
1132 bp (1011 high quality bases) assembled on 2010-11-12
> FMO10369.5prime
CAGTCGACATGTTACGCGAGGCTCTTAGGATCGGCAACAGGCGCTGGTAC
AGCTACAAGTCCGTCCGTCGTCCGAATCTGGGCGCCACAGGTACTCCAAA
GATGGAGCCGCCAAAGGAACAGCCGGAGGCGTCCTCCAAAGCGGAGAGCG
GACATGGCAGCCTGGCCAAGCAACTGAGGGCCAAGATTCTGTCCACCGGA
CCCATTCCTGTGGCCGAGTACATGCGCGAAGTGCTGACTAATCCCCAAGC
TGGCTACTATATGAACCGGGATGTGTTCGGCAGAGAGGGCGACTTCATAA
CCTCCCCGGAAATATCACAGATCTTCGGAGAGCTCGTGGGAATTTGGCTG
GTGAGCGAGTGGCGCAAAATGGGCAGTCCCTCGCCCTTTCAACTTGTGGA
GCTCGGTCCGGGTCGCGGCACACTGGCCAGGGACGTGCTGAAGGTGCTCA
CCAAGTTCAAGCAGGACGCCGAATTCTCAATGCACATGGTGGAGGTCAGT
CCGTTTCTGAGCAAGGCACAGGCACAGCGCTTCTGCTACTCCCACCAAAC
CCTGCCGGAGGACGCACAGTTGCCCCATTACCAGGAGGGCACAACGGCCA
GTGGAACGAAGGCATTCTGGCACCGTCGGCTAGAGGATGTGCCCCAGGGA
TTCTCCCTAGTTCTCGCCCACGAGTTCTTCGACGCCCTGCCTGTGCACAA
GCTCCAACTCGTAGATGGCAAGTGGCAGGAGGTGCTCATCGATGTGGCAT
CCTCTGATGGCGCACAAGAAGCTAGCTTCCGATATGTGCTCTCACGTAGC
CAAACACCCGTTTCGAGTCTTTATCGACCGCTGCCCGGCGAGACACGATC
CTGTTTGGAGCACTCCCTGAGACGGAACGACAGGTGGGACTGCTCGCCGA
GCGCATCGAACGGGATGGCGGCATCGCTCTAATCATGGATTATGGGCCAT
TTTGGCGAGAAAACCGACCCTTTCCGGGCCTTCAGCAGCACAAGCTGCAC
GATCCGCTGGTGGAGCCGGCATGCTGATCCTCACGGCCGAGGTGGACTTC
AAGCTATGCGGCAATTGCCGAGACCCGCGGAATGTTCCCCTGCCTGCGTC
CGTGAACAGAACTTTCTCGCACGATCAGGTGA
FMO10369.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:07:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17726-RA | 1409 | CG17726-RA | 39..1116 | 9..1082 | 5155 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:07:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11227179..11227934 | 331..1082 | 3350 | 98.3 | Plus |
| 3R | 32079331 | 3R | 11226800..11227123 | 9..332 | 1620 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:07:53 has no hits.
FMO10369.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:15:32 Download gff for
FMO10369.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17726-RA | 37..1133 | 9..1101 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:19:08 Download gff for
FMO10369.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17726-RA | 39..1135 | 9..1101 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:48:27 Download gff for
FMO10369.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17726-RA | 39..1135 | 9..1101 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:48:27 Download gff for
FMO10369.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11226800..11227123 | 9..332 | 100 | -> | Plus |
| 3R | 11227181..11227953 | 333..1101 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:19:08 Download gff for
FMO10369.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7052522..7052845 | 9..332 | 100 | -> | Plus |
| arm_3R | 7052903..7053675 | 333..1101 | 97 | | Plus |
