FMO10370.5prime Sequence
806 bp (806 high quality bases) assembled on 2010-11-12
> FMO10370.5prime
CAGTCGACATGCTGGACAAGGTTAAAAATGTTATCGTAGTGCTATCAGGC
AAGGGCGGAGTAGGAAAATCCACAGTGAGCACCCAATTATCGCTGGCACT
GCGAAAAAACGGATTTAAGGTTGGTCTGCTCGATATAGATCTGTGTGGAC
CGAGTGTGCCATATCTATTGGGTCTGGAAGGACGGGATATCTTCCAGTGC
GACGATGGATGGGTTCCTGTCTATACAGATGAATCCCAAACCTTGGCGGT
GATGTCCATTGGATTTTTATTGAAGAACCGTGAGGATCCGGTCATTTGGC
GTGGTCCCAAAAAGACCATGATGATCCGGCAGTTCCTCACCGACGTCAGG
TGGGATGAGCTGGATTACCTAATTATCGATACGCCACCCGGCACTTCGGA
TGAGCACATCACCGTAATGGAGTGCCTGAAGGAGGTTGGTTGCCACGGAG
CCATAATTGTGACCACACCGCAGGAGGTGGCCCTGGACGATGTACGCAAG
GAGATCACCTTCTGCAAGAAGACCGGCATCAATATCCTGGGCATCGTCGA
GAATATGAGTGGGTTCGTGTGCCCCCATTGCACCTCGTGCACCAATATAT
TCTCGTCAAACGGTGGCGTCTCACTGGCCACTTACGCCCAAGTACCACAT
CTAGGAACTCTGCCCATAGATCCCCGTGTTGGCATTTTGGCGGGCACCAC
TACGTCCGTCTTGGATGAGCTTCCGGATTCCACGACAGCGGAGGTGCTGA
CGCATATAGTTGAGAAGTTGAAAACGATGTTGGTCTCCGCAAGCTTTCTA
GACCAT
FMO10370.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:07:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4858-RA | 950 | CG4858-RA | 79..858 | 9..788 | 3900 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:07:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20526836..20527282 | 118..564 | 2235 | 100 | Plus |
| 3L | 28110227 | 3L | 20527592..20527818 | 562..788 | 1135 | 100 | Plus |
| 3L | 28110227 | 3L | 20526654..20526766 | 9..121 | 565 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:07:56 has no hits.
FMO10370.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:15:33 Download gff for
FMO10370.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4858-RA | 1..783 | 9..792 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:19:11 Download gff for
FMO10370.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4858-RA | 79..861 | 9..792 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:48:29 Download gff for
FMO10370.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4858-RA | 79..861 | 9..792 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:48:29 Download gff for
FMO10370.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20527593..20527821 | 563..792 | 99 | | Plus |
| 3L | 20526654..20526764 | 9..119 | 100 | -> | Plus |
| 3L | 20526838..20527280 | 120..562 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:19:11 Download gff for
FMO10370.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20520693..20520921 | 563..792 | 99 | | Plus |
| arm_3L | 20519754..20519864 | 9..119 | 100 | -> | Plus |
| arm_3L | 20519938..20520380 | 120..562 | 100 | -> | Plus |
