Clone FMO10371 Report

Search the DGRC for FMO10371

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:103
Well:71
Vector:pMK33-CFH-BD
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10371.5prime Sequence

569 bp (569 high quality bases) assembled on 2010-11-12

> FMO10371.5prime
CAGTCGACATGTATGTTCATGCGATTTATGAACATATGTTTAGCCATTTG
GCCGCTTTTGGCCAACTGTGCTTCGTGTTGGCTCCTGGGGAAAGTGCAAC
ATTTGCGACTCCATTAACGGGTACACTCACTAACGCCCTTCGGTTGCATC
TCCCTCACAGGCGCAATGGAGCCTCCAGCACAGCCTCCGAGCCGCTGCGT
CCCAATCTGGATGGCAGCCACCATCTGCAGGAGTACACCTACAAGAAGAT
AACGGCCTGCGACGTCTGCTCCCAGATTCTGAGAGGGCACACACGCCAGG
GATTACGCTGCCGCATCTGCAAGCTGAACGCCCATGGAGATTGCGCCCCC
AATCTGCCGCGCTGCCAGCCAAAGCAGAAGCTGCTCCGGCGACAGAAGAG
CACATCGGAGCTGGAGAATCGTGTTGATATCGAGGAAGAAACGTCAGCGA
ATCCGAAGTCCGAAACAACGCGACCCTTTGGCGAACCACTGATGCTCCTC
AAGAGCACGGAATCCAATCCGGATGAGTCCAAGGGCAATCGACGAGTGCG
CGCAAGCTTTCTAGACCAT

FMO10371.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:07:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG43729-RN 4584 CG43729-RN 3753..4145 159..551 1965 100 Plus
CG43729-RM 2382 CG43729-RM 1551..1943 159..551 1965 100 Plus
CG43729-RC 1842 CG43729-RC 1011..1403 159..551 1965 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:07:57
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 15456283..15456560 9..286 1390 100 Plus
2R 25286936 2R 15456658..15456815 284..441 790 100 Plus
2R 25286936 2R 15463298..15463407 442..551 550 100 Plus
Blast to na_te.dros performed on 2014-11-26 17:07:58 has no hits.

FMO10371.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:15:33 Download gff for FMO10371.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34365-RE 13..555 9..551 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:19:13 Download gff for FMO10371.5prime
Subject Subject Range Query Range Percent Splice Strand
CG43729-RB 5355..5747 159..551 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:48:30 Download gff for FMO10371.5prime
Subject Subject Range Query Range Percent Splice Strand
CG43729-RC 1011..1403 159..551 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:48:30 Download gff for FMO10371.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 15456283..15456559 9..285 100 -> Plus
2R 15456660..15456815 286..441 100 -> Plus
2R 15463298..15463407 442..551 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:19:13 Download gff for FMO10371.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 11343788..11344064 9..285 100 -> Plus
arm_2R 11344165..11344320 286..441 100 -> Plus
arm_2R 11350803..11350912 442..551 100   Plus