Clone FMO10382 Report

Search the DGRC for FMO10382

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:103
Well:82
Vector:pMK33-CFH-BD
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10382.5prime Sequence

836 bp (836 high quality bases) assembled on 2010-11-12

> FMO10382.5prime
CAGTCGACATGACCACCGCCGCCTCCACATCGCAGCATGCGACATCGTCC
TCCACAATGATGGCGGGCTCTGGATCCTTGGCGACCTCGTCGTCCGCCGC
TGCCCCCACAACCACGCCCAGCAGCTCGGCCGTTCGCGCCCTGGCCATGA
AGTTCCCGCACGACTATCCATACTCACCGCCATCCATACGCTTCCTGACG
AAGGTCTGGCATCCGAATGTTTACGAGAACGGTGATCTGTGCATATCCAT
ACTACATCCGCCGGTGGATGATCCGCAGAGTGGCGAGCTGCCCTGCGAAC
GCTGGAATCCCACGCAGAATGTGCGCACCATCCTGCTGTCGGTCATATCG
CTGCTCAATGAGCCGAACACATTCTCGCCGGCCAACGTGGACGCCTCGGT
CATGTACCGCCGATGGCGGGACTCACAGGACAATGAGTATCCAAACATCA
TACGAAAACAGGCACTGGCCGCCAATGCCGAGGCCAAGCGGGAGGGCATT
GTGGTTCCGATGACCCTGGAGGACTACTGCCTGAAGCCCACGCGCAAGCC
CACAACGGAGTCTGGCCTGGATGCCAACTTCTACGATGATGATTTCGATC
TGGAGACGGAGGATGATCTGCCATCTGATGATGACTTCGATGAGGACGAC
GACGATGATGAGGACGAGGATGAAGATGAGGACAGTGCCACGGCGCCGAT
TAGCAAAAATAATGGAGGCAGCAGCAAGTGCAAGAACAACGGGCTGGTCA
GAGAGGCGGCCGCCGCCGGAGCGGACGATGCCGAATCCGCTGATGACAGC
GGCAAGGGCGAGACCACAGCAAGCTTTCTAGACCAT

FMO10382.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:08:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG7656-RF 2027 CG7656-RF 581..1253 146..818 3365 100 Plus
CG7656-RA 1504 CG7656-RA 431..1103 146..818 3365 100 Plus
CG7656-RE 1234 CG7656-RE 431..1109 146..818 3295 99.1 Plus
CG7656-RF 2027 CG7656-RF 303..447 9..153 710 99.3 Plus
CG7656-RA 1504 CG7656-RA 153..297 9..153 710 99.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:08:21
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15586205..15586596 818..427 1960 100 Minus
3L 28110227 3L 15587004..15587287 429..146 1420 100 Minus
3L 28110227 3L 15587421..15587565 153..9 710 99.3 Minus
Blast to na_te.dros performed on 2014-11-26 17:08:22 has no hits.

FMO10382.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:15:39 Download gff for FMO10382.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7656-RA 144..286 9..152 98 -> Plus
CG7656-RA 429..1097 153..822 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:19:31 Download gff for FMO10382.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7656-RA 153..295 9..152 98 -> Plus
CG7656-RA 438..1106 153..822 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:48:48 Download gff for FMO10382.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7656-RA 153..295 9..152 98 -> Plus
CG7656-RA 438..1106 153..822 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:48:48 Download gff for FMO10382.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 15586202..15586594 429..822 99 <- Minus
3L 15587005..15587280 153..428 100 <- Minus
3L 15587423..15587565 9..152 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:19:31 Download gff for FMO10382.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15580105..15580380 153..428 100 <- Minus
arm_3L 15580523..15580665 9..152 98   Minus
arm_3L 15579302..15579694 429..822 99 <- Minus