FMO10382.5prime Sequence
836 bp (836 high quality bases) assembled on 2010-11-12
> FMO10382.5prime
CAGTCGACATGACCACCGCCGCCTCCACATCGCAGCATGCGACATCGTCC
TCCACAATGATGGCGGGCTCTGGATCCTTGGCGACCTCGTCGTCCGCCGC
TGCCCCCACAACCACGCCCAGCAGCTCGGCCGTTCGCGCCCTGGCCATGA
AGTTCCCGCACGACTATCCATACTCACCGCCATCCATACGCTTCCTGACG
AAGGTCTGGCATCCGAATGTTTACGAGAACGGTGATCTGTGCATATCCAT
ACTACATCCGCCGGTGGATGATCCGCAGAGTGGCGAGCTGCCCTGCGAAC
GCTGGAATCCCACGCAGAATGTGCGCACCATCCTGCTGTCGGTCATATCG
CTGCTCAATGAGCCGAACACATTCTCGCCGGCCAACGTGGACGCCTCGGT
CATGTACCGCCGATGGCGGGACTCACAGGACAATGAGTATCCAAACATCA
TACGAAAACAGGCACTGGCCGCCAATGCCGAGGCCAAGCGGGAGGGCATT
GTGGTTCCGATGACCCTGGAGGACTACTGCCTGAAGCCCACGCGCAAGCC
CACAACGGAGTCTGGCCTGGATGCCAACTTCTACGATGATGATTTCGATC
TGGAGACGGAGGATGATCTGCCATCTGATGATGACTTCGATGAGGACGAC
GACGATGATGAGGACGAGGATGAAGATGAGGACAGTGCCACGGCGCCGAT
TAGCAAAAATAATGGAGGCAGCAGCAAGTGCAAGAACAACGGGCTGGTCA
GAGAGGCGGCCGCCGCCGGAGCGGACGATGCCGAATCCGCTGATGACAGC
GGCAAGGGCGAGACCACAGCAAGCTTTCTAGACCAT
FMO10382.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:08:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7656-RF | 2027 | CG7656-RF | 581..1253 | 146..818 | 3365 | 100 | Plus |
CG7656-RA | 1504 | CG7656-RA | 431..1103 | 146..818 | 3365 | 100 | Plus |
CG7656-RE | 1234 | CG7656-RE | 431..1109 | 146..818 | 3295 | 99.1 | Plus |
CG7656-RF | 2027 | CG7656-RF | 303..447 | 9..153 | 710 | 99.3 | Plus |
CG7656-RA | 1504 | CG7656-RA | 153..297 | 9..153 | 710 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:08:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 15586205..15586596 | 818..427 | 1960 | 100 | Minus |
3L | 28110227 | 3L | 15587004..15587287 | 429..146 | 1420 | 100 | Minus |
3L | 28110227 | 3L | 15587421..15587565 | 153..9 | 710 | 99.3 | Minus |
Blast to na_te.dros performed on 2014-11-26 17:08:22 has no hits.
FMO10382.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:15:39 Download gff for
FMO10382.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7656-RA | 144..286 | 9..152 | 98 | -> | Plus |
CG7656-RA | 429..1097 | 153..822 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:19:31 Download gff for
FMO10382.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7656-RA | 153..295 | 9..152 | 98 | -> | Plus |
CG7656-RA | 438..1106 | 153..822 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:48:48 Download gff for
FMO10382.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7656-RA | 153..295 | 9..152 | 98 | -> | Plus |
CG7656-RA | 438..1106 | 153..822 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:48:48 Download gff for
FMO10382.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 15586202..15586594 | 429..822 | 99 | <- | Minus |
3L | 15587005..15587280 | 153..428 | 100 | <- | Minus |
3L | 15587423..15587565 | 9..152 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:19:31 Download gff for
FMO10382.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 15580105..15580380 | 153..428 | 100 | <- | Minus |
arm_3L | 15580523..15580665 | 9..152 | 98 | | Minus |
arm_3L | 15579302..15579694 | 429..822 | 99 | <- | Minus |