FMO10384.5prime Sequence
1106 bp (1008 high quality bases) assembled on 2010-11-12
> FMO10384.5prime
CAGTCGACATGGAGCTACCGAAGGAGTTATCCGTTGCGGAGATCCGTAAT
TACATGTTGGCAAACGAGTGCAAGGTGACAAATCACGCCTTGGTGAAGCA
CTTCAAGAAATTCCTAACTCACCCGCAGTCGCAAAATGAGGCTCGCAAGC
GATTCAAGACCTATGTCACACTGCTGTCCACCATCAAGAACGAGAACAAT
CAGAAGTTTTTGATATTGCGCAAGAAATACGTAAACGAATGCCCCACGGA
TGAGGTTGTGGAGCGCGCGGTGGCCGCCGCATCTGGTATTCCGGAGCCCT
CAAGTCCCGGCGGCGCATCTCTTAACTTTGACTCGCCCATGAGGCAGCCA
CCGCCATATAAACCGCCGCCCATGGTCACCTCTCCGCCAGCCGTTTCCAT
TGCCAAGGAGCACCAGGAGAATTACCAGGAGTGCGTGGACGAATTCACGG
CTGCCATAAAGCGCATTGAGCCAGCACGCTTGGAGAGGCGAACGTCGGTC
AAGTCCGAGGATCTGGATCAGCAGGAGAAGCCGGAGAAAACGTCTCGATC
GAATTCCATCGATGTGATCGACAACAAGGAGAACATACCACGTTTCTCCT
TCTCCTCGGAGGCCTCCTCGGCGTCCAGCACTTCCATTGAAAAGCCGGAG
ATGGCTGATCCCACAGCTCCCGCCGCCGTACGCGATGTGGCCGAGAATCC
CATCAGCGTGAAGGAGGCCACGCGCAAATTTAATCGGATGGCGTCTGAAG
AAGAGGCTAAAATCATATCGCCGCCAGCTAAGAAGAAGCCAGAGAAGCAA
TTAATCGAGGAGAAAGATTCACCGGAGTTACGCTGGCGCATCCCAAGCAA
AGGAGTGGATAGTCTCGATGGCGAAGCTAATTACCAGGAGCTGGCCAAGA
TGGCCAGTGAGTATCCCGGAACTGGTTAAGCTGCAGTGCCCTGCAACGGG
CTATACCGCCTCTACACTGGGCAGCGAAGCACGAAACGAGATGTGGTTAA
CTAATTGCCGCACTACAGGCGATGTGAATGCAGACGACGGGGATACCCTC
CCTCTCCCATTTGCTAACCCAGTTTGTAGGATAATTTTCTTTTGAATATA
CTCCTT
FMO10384.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:08:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| sowah-RI | 2314 | CG10632-RI | 105..1193 | 9..1085 | 4875 | 97.7 | Plus |
| sowah-RG | 2749 | CG10632-RG | 105..1193 | 9..1085 | 4875 | 97.7 | Plus |
| sowah-RH | 2360 | CG10632-RH | 105..1193 | 9..1085 | 4875 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:08:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12571539..12572200 | 797..136 | 3295 | 99.8 | Minus |
| 3L | 28110227 | 3L | 12572307..12572438 | 140..9 | 645 | 99.2 | Minus |
| 3L | 28110227 | 3L | 12564899..12565041 | 936..796 | 505 | 96.5 | Minus |
Blast to na_te.dros performed on 2014-11-26 17:08:28 has no hits.
FMO10384.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:15:40 Download gff for
FMO10384.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10632-RF | 78..1111 | 1..1034 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:19:37 Download gff for
FMO10384.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sowah-RH | 98..1137 | 1..1034 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:48:51 Download gff for
FMO10384.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sowah-RH | 98..1137 | 1..1034 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:48:51 Download gff for
FMO10384.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12571539..12572200 | 136..797 | 99 | <- | Minus |
| 3L | 12572312..12572444 | 1..135 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:19:37 Download gff for
FMO10384.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12564639..12565300 | 136..797 | 99 | <- | Minus |
| arm_3L | 12565412..12565544 | 1..135 | 97 | | Minus |
