Clone FMO10389 Report

Search the DGRC for FMO10389

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:103
Well:89
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG6138-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10389.5prime Sequence

581 bp (581 high quality bases) assembled on 2010-11-12

> FMO10389.5prime
CAGTCGACATGGAGGATGACTTGGAGTTTCTTATCAACGCCCTGTCGGTG
CCAAACACTCCACTCACCGAACCCTACGATGAGGGGCAACTTCTAGAGAT
GCGTGAATCCTTCAAGACGCTGCAGAAGCTCCTGCGGCGCAGTTCGCTGC
CCGTAGAGGAGAGTCTGCGTTCCATGCCGAGATCGAAAGCTGGAGGTCAA
CTGGAGGCATTGCCATCCTTGCTGCCTATTGTGGACAACAATTACGAGAG
GACCAGCGATAAGGCGTGGAACTCGGCGGAAAGCGGAGCCCGTTCGTCGC
CCATCATTTCGGAGTGCGGCCTGGGTGATTGGGATAAGGAGGATCCTTCA
GATCCTTCAGATAGGGCACTGGTGCCCTACGAGGAACTGGGCAATGAGCG
AAGCAGTTCGGACACCACAATCACCAGCCGTAGCTTCGCATCGTCGGGAA
TCTCGCTCAGCATACCTGTTCACTTGGTATGGAACAACAAAGAGTACAAT
CAGGAGAGCACGGACAGTGAAACTACACTTATAGCGGACGGGCGCAGATA
CAGTATTACAAATGCAAGCTTTCTAGACCAT

FMO10389.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:08:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG6138-RA 758 CG6138-RA 128..683 8..563 2780 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:08:35
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10567382..10567937 8..563 2780 100 Plus
Blast to na_te.dros performed on 2014-11-26 17:08:36 has no hits.

FMO10389.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:15:42 Download gff for FMO10389.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6138-RA 89..653 1..569 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:19:45 Download gff for FMO10389.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6138-RA 124..688 1..569 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:48:57 Download gff for FMO10389.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6138-RA 124..688 1..569 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:48:57 Download gff for FMO10389.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 10567378..10567942 1..569 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:19:45 Download gff for FMO10389.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10567378..10567942 1..569 98   Plus