FMO10403.5prime Sequence
692 bp (692 high quality bases) assembled on 2010-11-30
> FMO10403.5prime
CAATCCACATGAGCTCGAGCAGAACGAGGAACGGCCCCCCGCTTAATTTC
AAGGCGGTGCTGCTGGGCGAAGGTTGTGTGGGCAAGACGTCGCTGGTGCT
GCGCTACATGGAAGACCGGTTCAATGCCCATCACCTAAGCACCCTGCAGG
CTTCCTTTGTCAGCCGCAAGATGTCCCTGGAGGATGGGAGAAGGGCGCAG
TTGAATATTTGGGACACGGCTGGTCAGGAGCGGTTCCACGCCCTGGGACC
CATCTACTATCGCGGCTCCGATGGCGCCCTGCTCGTCTATGACATAACGG
ACCGAGACTCGTTCCAGAAAGTCAAATCCTGGGTGCGGGAGCTCCGGCAA
ATGCGCGGCACGGAGATTGCCTTAATAATCGTCGGCAACAAGACTGATTT
GGAGGAACAGCGAGCAATAACGTTTTATGAGGCCCTTCAATATGCGCGCA
CGGTTGGCGCTCAATATGTAGAAACTTCGGCCAAGGAGAACGAGGGGGTG
GCTGAGCTCTTCGAGCTCCTGACCCAGCTGATGCTGGAGCAGTTGAGCCA
ACGGCAACCGGATGCGAGTCCACTTCGCCTCCAGAATCCGGATACGGATA
ACCTTAACAACTCCGATGACTCGGAGGCCCCGGATCCCGGAGATCCTGCG
GGCCATCGGTCCTGTTGCGGCATTGCAAGCTTTCTAGACCAT
FMO10403.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:12:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Rab21-RC | 1064 | CG17515-RC | 159..824 | 9..674 | 3195 | 98.6 | Plus |
Rab21-RD | 1050 | CG17515-RD | 145..810 | 9..674 | 3195 | 98.6 | Plus |
Rab21-RA | 1077 | CG17515-RA | 234..837 | 71..674 | 2900 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:12:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 23012380..23012983 | 674..71 | 2900 | 98.7 | Minus |
X | 23542271 | X | 23013041..23013106 | 74..9 | 315 | 98.5 | Minus |
Blast to na_te.dros performed on 2014-11-26 17:12:09 has no hits.
FMO10403.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-12-01 09:52:57 Download gff for
FMO10403.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Rab21-RC | 145..823 | 1..680 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:22:13 Download gff for
FMO10403.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Rab21-RD | 136..814 | 1..680 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:51:07 Download gff for
FMO10403.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Rab21-RD | 136..814 | 1..680 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:51:07 Download gff for
FMO10403.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 23012376..23012981 | 73..680 | 98 | <- | Minus |
X | 23013043..23013113 | 1..72 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:22:13 Download gff for
FMO10403.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 22414212..22414817 | 73..680 | 98 | <- | Minus |
arm_X | 22414879..22414949 | 1..72 | 94 | | Minus |