FMO10412.5prime Sequence
408 bp (408 high quality bases) assembled on 2010-11-30
> FMO10412.5prime
CAGTCGACATGCCGTACATAATCATACGGGGGAATCTAGCCTCCTACAGC
CACAAATATCCATGGAGGGTGCTCGTCTCCGGGTTGAAAGCTGACGACAT
CGAGCAGTTGAACAAGTTCTCCTGCGGCGGCTACAGCGACGAGTCCACCA
TCGTCTACTTAGTGCATCCTTGTCGGATTTTATCGGCGCTAGAAATCCTG
GGATTTCGCGTAGTGGCCAGCTCATCGACTGCCGTGAAGCAGGACTACAA
CGAGTACATGTGGACGATGCGCAAGGAGTTCGACGAACCAGAACCCTTGG
AAGCCGAGTCCGTGGTGCGAGAAAATCTATCGAATATTGGCCGCGAGGCA
GCCAGTTTATTTTAACTATCACAAGGTGGATTCGCCTGAAGCAAGCTTTC
TAGACCAT
FMO10412.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:12:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG44001-RE | 2431 | CG44001-RE | 156..536 | 9..390 | 1840 | 99 | Plus |
CG44001-RD | 2415 | CG44001-RD | 140..520 | 9..390 | 1840 | 99 | Plus |
CG44001-RA | 2691 | CG44001-RA | 416..796 | 9..390 | 1840 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:12:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 5046147..5046341 | 195..390 | 885 | 98 | Plus |
2L | 23513712 | 2L | 5045820..5045925 | 89..194 | 530 | 100 | Plus |
2L | 23513712 | 2L | 5044608..5044689 | 9..90 | 410 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:12:04 has no hits.
FMO10412.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-12-01 09:52:56 Download gff for
FMO10412.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31919-RC | 409..797 | 1..390 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:22:09 Download gff for
FMO10412.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG44001-RA | 408..796 | 1..390 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:51:02 Download gff for
FMO10412.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG44001-RA | 408..796 | 1..390 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:51:02 Download gff for
FMO10412.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 5046147..5046341 | 195..390 | 97 | | Plus |
2L | 5044600..5044689 | 1..90 | 95 | -> | Plus |
2L | 5045822..5045925 | 91..194 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:22:09 Download gff for
FMO10412.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 5044600..5044689 | 1..90 | 95 | -> | Plus |
arm_2L | 5045822..5045925 | 91..194 | 100 | -> | Plus |
arm_2L | 5046147..5046341 | 195..390 | 97 | | Plus |