FMO10417.5prime Sequence
749 bp (749 high quality bases) assembled on 2010-11-30
> FMO10417.5prime
CAGTCGACATGAGCAGCGCTTTGAACGCCAAGGAGTTACTTATACGCGCC
GTGGAATGCGACCAAGTTGGACGGATCTTGGAGGCGCAAACGCTGTACAC
AGAGGGGATCGGGCAGTTGATGCAGTTCGTCAACGGGGAACCGGATGAAG
CCAAACGGAAGGGGTTCCTGACCAGGATCAAGGAGTACATGGATCGGGCT
GACGCAATTAAGGCGCGGATCAATGGCAAACTAATGCTCGGCGAGGTGGT
TTCCCACGTTTCCATCGACGAGAATGATACGGGCTTCGACTACGATCAGC
TCTTCGGGAAATACATGGACGACAAGACCGTCGAGATCATGCTGGAGGAA
CCCTACATGACGCAGAACTATCAGTATCAAAATCTAATAAGATTCTTGGA
GCTAGCTGCCACAAATTGCCCAAACCTTTTGTATTTTCGACTGATCACCA
AAGAGTACAAGGATGCAAAGAATCCAGATCAGCAGGAAACAAATCTTGGA
CAGATCAAGGGTGACTTGGAGCGGCGGAACGTGACTGTCTACATAAAATA
CGAAGACTCTCTGCACGATCGAAAAATTTACTTAAGCAATGGCTATATAA
TTAAGATTGGGCGAGGTCTGCACTTCTACAAGCCCGCCAATCCGATGTAT
TCCATTGGCCTGGTCAACTACAAATTCCGAAAATGCCTCCAAACGGATGT
GGATATATGGCGCAACTCAAGCGCTGCATCGGCAAGCTTTCTAGACCAT
FMO10417.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:12:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14985-RB | 2808 | CG14985-RB | 126..848 | 9..731 | 3555 | 99.4 | Plus |
| CG14985-RC | 1859 | CG14985-RC | 126..701 | 9..584 | 2820 | 99.3 | Plus |
| CG14985-RC | 1859 | CG14985-RC | 798..948 | 581..731 | 740 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:12:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4003599..4003964 | 9..374 | 1830 | 100 | Plus |
| 3L | 28110227 | 3L | 4004133..4004341 | 372..580 | 1000 | 98.6 | Plus |
| 3L | 28110227 | 3L | 4004516..4004666 | 581..731 | 740 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:12:18 has no hits.
FMO10417.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-12-01 09:53:00 Download gff for
FMO10417.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14985-RB | 128..854 | 9..735 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:22:19 Download gff for
FMO10417.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14985-RB | 126..852 | 9..735 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:51:13 Download gff for
FMO10417.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14985-RB | 126..852 | 9..735 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:51:13 Download gff for
FMO10417.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4004516..4004670 | 581..735 | 98 | | Plus |
| 3L | 4004136..4004341 | 375..580 | 98 | -> | Plus |
| 3L | 4003599..4003964 | 9..374 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:22:19 Download gff for
FMO10417.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4004136..4004341 | 375..580 | 98 | -> | Plus |
| arm_3L | 4004516..4004670 | 581..735 | 98 | | Plus |
| arm_3L | 4003599..4003964 | 9..374 | 100 | -> | Plus |
