FMO10418.5prime Sequence
1085 bp (1019 high quality bases) assembled on 2010-11-30
> FMO10418.5prime
CAGTCGACATGCCACGCAATACCAAAGACACCACCGGAGTGCTTTACGAA
TCCGATGTCGAGACAGTAGACGGTGGATTGTCGACGGAGCTAAGCAATCG
GAAGACCACCGATGGAAGTAAACTGGAGTTGGTATGGGTCAATATAGTGC
TGTTCGTGATCCTTCACATATCTTCGCTATATGGAGTCTGGCTGCTCTTC
ACTTCGGCCACGTGGACAACGGTCGTGCTCTTTTGGCCAACGGTTGTGGT
GACCATTTTGGGAGTTTCCGGCGGTGCCCATCGTTTGTGGGCTCATCGCA
CATTCAAGGCGAATACACCGCTCAAGCTGATCTTTTTGTTCCTGAACACT
TTGGCCTTTCAGGATGCGGTCTACTATTGGGCCCGGGATCATCGCGTCCA
CCACAAGTATACGGAAACTGATGCTGATTCGTACAATTCGCAACGTGGTT
GGTTCTTTGCCCACATCGGTTGGTTGTGCTGCCGCAAGCATCCGGAGGTT
GTGGAGAAGGGCAAGCAAATAGATCTATCCGATCTGGAGGCAGATCCACT
GATCATGTTCCAGAAGAAATACTACCTGCTGCTAATGCCAATCATTTGCT
TTGTCCTGCCCACCGTTTTGCCCATGTATCTGTGGGGCGAATCACTCAAT
GTGTCCTGGCACGTGATGGCCCTGCTTCGATGGTGCCTCAGTCTCAATCT
CATCTGGACGGTCAATAGCTCGGCCCACATGCACGGCATGCGGCCTTACG
ACAAGAACATATGTCCAGTCGATCAGGGCTTCCTCATATTTTTCCGTGTG
GGTGAGGGATACCACAACTACCACCATGTCTTTCCCTGGGACTACAAGAG
CGCCGAGCTGGGCAAGTATTCGCAGATGTGACCACCAAGTTTATCGAATT
CATGGCCTATTTGGGTTGGGCCTACGATCTAAAGAGTGTCTCACTGGATT
TGGTCAAGCAGCGAGTCCAGGGCTCTGGCGATGGATCACATCCTGTTTGG
GGTTGGGGGCGATAAGGATCATAAAGGAGACGTGGGGCGTGAACCCATTA
CCCACAACGAATTGAAAAGCAGCTTTCTAGAACAT
FMO10418.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:12:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fad2-RA | 1312 | CG7923-RA | 4..1069 | 8..1069 | 5060 | 98.7 | Plus |
| Desat1-RD | 1934 | CG5887-RD | 454..814 | 268..628 | 355 | 74.2 | Plus |
| Desat1-RB | 1978 | CG5887-RB | 498..858 | 268..628 | 355 | 74.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:12:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11023538..11024551 | 8..1021 | 4930 | 99.5 | Plus |
| 3R | 32079331 | 3R | 12446014..12446314 | 268..568 | 275 | 72.8 | Plus |
| 3R | 32079331 | 3R | 12436761..12436930 | 259..428 | 265 | 77.1 | Plus |
| 3R | 32079331 | 3R | 13283528..13283588 | 804..864 | 185 | 86.9 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:12:21 has no hits.
FMO10418.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-12-01 09:53:00 Download gff for
FMO10418.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fad2-RA | 2..1042 | 7..1045 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:22:21 Download gff for
FMO10418.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fad2-RA | 2..1042 | 7..1045 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:51:14 Download gff for
FMO10418.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fad2-RA | 2..1042 | 7..1045 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:51:14 Download gff for
FMO10418.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11023532..11024576 | 1..1045 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:22:21 Download gff for
FMO10418.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11016632..11017676 | 1..1045 | 98 | | Plus |
