Clone FMO10421 Report

Search the DGRC for FMO10421

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:104
Well:21
Vector:pMK33-CFH-BD
Associated Gene/TranscriptHis1:CG33804-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10421.5prime Sequence

794 bp (794 high quality bases) assembled on 2010-11-30

> FMO10421.5prime
CAGTCGACATGTCTGATTCTGCAGTTGCAACGTCCGCTTCCCCAGTGGCT
GCCCCACCAGCGACAGTTGAGAAGAAAGTGGTCCAAAAAAAGGCATCTGG
ATCTGCTGGCACAAAGGCAAAGAAAGCCTCTGCGACGCCGTCACATCCGC
CAACTCAGCAAATGGTGGACGCTTCCATTAAAAATTTAAAGGAACGTGGC
GGTTCATCACTTCTGGCAATCAAAAAATATATCACTGCCACTTATAAATG
CGACGCCCAAAAGTTAGCGCCATTCATCAAGAAGTACTTAAAATCGGCCG
TGGTCAATGGAAAGCTTATTCAAACTAAGGGAAAGGGTGCATCTGGATCT
TTCAAACTGTCGGCCTCTGCCAAGAAGGAAAAGGATCCGAAGGCAAAGTC
GAAGGTTTTGTCTGCTGAGAAAAAAGTTCTAAGCAAGAAGGTAGCCTCTA
AGAAGATTGGTGTCTCCTCCAAAAAAACTGCCGTTGGGGCTGCTGACAAA
AAGCCCAAAGCTAAGAAGGCTGTGGCTACCAAAAAGACTGCCGAAAATAA
GAAAACTGAGAAGGCAAAAGCCAAGGATGCCAAGAAAACTGGAATCATAA
AGTCGAAGCCCGCCGCAACAAAGGCGAAAGTGACTGCAGCGAAGCCAAAG
GCTGTAGTAGCGAAAGCGTCAAAGGCAAAGCCAGCGGTGTCTGCAAAACC
CAAAAAGACGGTGAAGAAAGCATCGGTTTCTGCTACCGCCAAGAAGCCGA
AAGCGAAGACTACGGCTGCCAAAAAGGCAAGCTTTCTAGACCAT

FMO10421.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:12:30
Subject Length Description Subject Range Query Range Score Percent Strand
His1:CG33864-RA 1023 CG33864-RA 160..927 9..776 3825 99.9 Plus
His1:CG33852-RA 1023 CG33852-RA 160..927 9..776 3825 99.9 Plus
His1:CG33849-RA 1023 CG33849-RA 160..927 9..776 3825 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:12:27
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 21427075..21427842 9..776 3825 99.9 Plus
2L 23513712 2L 21491700..21492467 9..776 3825 99.9 Plus
2L 23513712 2L 21496745..21497512 9..776 3825 99.9 Plus
2L 23513712 2L 21501792..21502559 9..776 3825 99.9 Plus
2L 23513712 2L 21506843..21507610 9..776 3825 99.9 Plus
2L 23513712 2L 21511887..21512654 9..776 3825 99.9 Plus
2L 23513712 2L 21516932..21517699 9..776 3825 99.9 Plus
2L 23513712 2L 21536505..21537272 9..776 3825 99.9 Plus
2L 23513712 2L 21417112..21417879 9..776 3810 99.7 Plus
2L 23513712 2L 21432122..21432889 9..776 3810 99.7 Plus
2L 23513712 2L 21437170..21437937 9..776 3810 99.7 Plus
2L 23513712 2L 21456272..21457039 9..776 3810 99.7 Plus
2L 23513712 2L 21461332..21462099 9..776 3810 99.7 Plus
2L 23513712 2L 21466375..21467142 9..776 3810 99.7 Plus
2L 23513712 2L 21471418..21472185 9..776 3810 99.7 Plus
2L 23513712 2L 21476461..21477228 9..776 3810 99.7 Plus
2L 23513712 2L 21481504..21482271 9..776 3810 99.7 Plus
2L 23513712 2L 21422014..21422781 9..776 3795 99.6 Plus
2L 23513712 2L 21451211..21451978 9..776 3795 99.6 Plus
2L 23513712 2L 21521775..21522542 9..776 3780 99.5 Plus
2L 23513712 2L 21526618..21527385 9..776 3780 99.5 Plus
2L 23513712 2L 21531461..21532228 9..776 3780 99.5 Plus
2L 23513712 2L 21486655..21487422 9..776 3765 99.3 Plus
2L 23513712 2L 21543023..21543688 9..674 3255 99.2 Plus
Blast to na_te.dros performed on 2014-11-26 17:12:29 has no hits.

FMO10421.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-12-01 09:53:01 Download gff for FMO10421.5prime
Subject Subject Range Query Range Percent Splice Strand
His1:CG33840-RA 35..808 9..784 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:22:25 Download gff for FMO10421.5prime
Subject Subject Range Query Range Percent Splice Strand
His1:CG33846-RA 160..933 9..784 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:51:18 Download gff for FMO10421.5prime
Subject Subject Range Query Range Percent Splice Strand
His1:CG33849-RA 160..933 9..784 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:51:18 Download gff for FMO10421.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 21427075..21427848 9..784 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:22:25 Download gff for FMO10421.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 21427075..21427848 9..784 99   Plus