FMO10421.5prime Sequence
794 bp (794 high quality bases) assembled on 2010-11-30
> FMO10421.5prime
CAGTCGACATGTCTGATTCTGCAGTTGCAACGTCCGCTTCCCCAGTGGCT
GCCCCACCAGCGACAGTTGAGAAGAAAGTGGTCCAAAAAAAGGCATCTGG
ATCTGCTGGCACAAAGGCAAAGAAAGCCTCTGCGACGCCGTCACATCCGC
CAACTCAGCAAATGGTGGACGCTTCCATTAAAAATTTAAAGGAACGTGGC
GGTTCATCACTTCTGGCAATCAAAAAATATATCACTGCCACTTATAAATG
CGACGCCCAAAAGTTAGCGCCATTCATCAAGAAGTACTTAAAATCGGCCG
TGGTCAATGGAAAGCTTATTCAAACTAAGGGAAAGGGTGCATCTGGATCT
TTCAAACTGTCGGCCTCTGCCAAGAAGGAAAAGGATCCGAAGGCAAAGTC
GAAGGTTTTGTCTGCTGAGAAAAAAGTTCTAAGCAAGAAGGTAGCCTCTA
AGAAGATTGGTGTCTCCTCCAAAAAAACTGCCGTTGGGGCTGCTGACAAA
AAGCCCAAAGCTAAGAAGGCTGTGGCTACCAAAAAGACTGCCGAAAATAA
GAAAACTGAGAAGGCAAAAGCCAAGGATGCCAAGAAAACTGGAATCATAA
AGTCGAAGCCCGCCGCAACAAAGGCGAAAGTGACTGCAGCGAAGCCAAAG
GCTGTAGTAGCGAAAGCGTCAAAGGCAAAGCCAGCGGTGTCTGCAAAACC
CAAAAAGACGGTGAAGAAAGCATCGGTTTCTGCTACCGCCAAGAAGCCGA
AAGCGAAGACTACGGCTGCCAAAAAGGCAAGCTTTCTAGACCAT
FMO10421.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:12:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
His1:CG33864-RA | 1023 | CG33864-RA | 160..927 | 9..776 | 3825 | 99.9 | Plus |
His1:CG33852-RA | 1023 | CG33852-RA | 160..927 | 9..776 | 3825 | 99.9 | Plus |
His1:CG33849-RA | 1023 | CG33849-RA | 160..927 | 9..776 | 3825 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:12:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 21427075..21427842 | 9..776 | 3825 | 99.9 | Plus |
2L | 23513712 | 2L | 21491700..21492467 | 9..776 | 3825 | 99.9 | Plus |
2L | 23513712 | 2L | 21496745..21497512 | 9..776 | 3825 | 99.9 | Plus |
2L | 23513712 | 2L | 21501792..21502559 | 9..776 | 3825 | 99.9 | Plus |
2L | 23513712 | 2L | 21506843..21507610 | 9..776 | 3825 | 99.9 | Plus |
2L | 23513712 | 2L | 21511887..21512654 | 9..776 | 3825 | 99.9 | Plus |
2L | 23513712 | 2L | 21516932..21517699 | 9..776 | 3825 | 99.9 | Plus |
2L | 23513712 | 2L | 21536505..21537272 | 9..776 | 3825 | 99.9 | Plus |
2L | 23513712 | 2L | 21417112..21417879 | 9..776 | 3810 | 99.7 | Plus |
2L | 23513712 | 2L | 21432122..21432889 | 9..776 | 3810 | 99.7 | Plus |
2L | 23513712 | 2L | 21437170..21437937 | 9..776 | 3810 | 99.7 | Plus |
2L | 23513712 | 2L | 21456272..21457039 | 9..776 | 3810 | 99.7 | Plus |
2L | 23513712 | 2L | 21461332..21462099 | 9..776 | 3810 | 99.7 | Plus |
2L | 23513712 | 2L | 21466375..21467142 | 9..776 | 3810 | 99.7 | Plus |
2L | 23513712 | 2L | 21471418..21472185 | 9..776 | 3810 | 99.7 | Plus |
2L | 23513712 | 2L | 21476461..21477228 | 9..776 | 3810 | 99.7 | Plus |
2L | 23513712 | 2L | 21481504..21482271 | 9..776 | 3810 | 99.7 | Plus |
2L | 23513712 | 2L | 21422014..21422781 | 9..776 | 3795 | 99.6 | Plus |
2L | 23513712 | 2L | 21451211..21451978 | 9..776 | 3795 | 99.6 | Plus |
2L | 23513712 | 2L | 21521775..21522542 | 9..776 | 3780 | 99.5 | Plus |
2L | 23513712 | 2L | 21526618..21527385 | 9..776 | 3780 | 99.5 | Plus |
2L | 23513712 | 2L | 21531461..21532228 | 9..776 | 3780 | 99.5 | Plus |
2L | 23513712 | 2L | 21486655..21487422 | 9..776 | 3765 | 99.3 | Plus |
2L | 23513712 | 2L | 21543023..21543688 | 9..674 | 3255 | 99.2 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:12:29 has no hits.
FMO10421.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-12-01 09:53:01 Download gff for
FMO10421.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
His1:CG33840-RA | 35..808 | 9..784 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:22:25 Download gff for
FMO10421.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
His1:CG33846-RA | 160..933 | 9..784 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:51:18 Download gff for
FMO10421.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
His1:CG33849-RA | 160..933 | 9..784 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:51:18 Download gff for
FMO10421.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 21427075..21427848 | 9..784 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:22:25 Download gff for
FMO10421.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 21427075..21427848 | 9..784 | 99 | | Plus |