FMO10423.5prime Sequence
1081 bp (929 high quality bases) assembled on 2010-11-30
> FMO10423.5prime
ATTCCTGCTCCGCTTAGCCGTATCCCGGGCACCAGCCAGGCGAAGGAGAA
GCACAGCAAGGACCTGAAGACCCTCACCTATCCGCAGCTGCTGGAGATTA
AGGACAGGCAGTCTCACTTTCTGTCGTTCAAAAAGCGTTTGCACCAACTG
CCGGACAAGGGAAAGCGTCTGCAGGAGTCGTACGACAAATTACTGGCCGA
GATCAGGAGGCGGGATGAAGTAGAGGAAGCGACTCGAATGTTGAGCGGTC
TCAACATTGTCGAAAAGGGCAAAATTGCTCTCAACAATCTGGAGTGGAAT
GGCAGAAACACGGACGAGGGCGCCCATGTGGACGACATTCTGGACAGCGA
TGATGAGGTGGAGATGGATCCGCTGCGGATTATAGCGCAGGGAACAATGC
ACGAGAAGAAGGTCAAGGTTTTGCCTCCGCCAACGAGTTTCATTACGGCA
GATGACCTGGCGGATATCGAGGAGTTTAAGAAACCAACCGACTCCCCAGA
TTCCGCTTTGGCAGGACATAGTGACACCAGTTCCCTTCCAGCCGAAATCG
TAGAAATCGACGCCAGTCAAGTGGCCGCAAAGCTGAGCAGGGAGCTGCCT
CCCGATCAGCATGCCCTCTACCTCATCGATAAGACGGAAACAAATGTGAA
TACTCCTAGGGAAAAGTTTATGCCATTCCGCACCACGAAGTCCAATGTCC
ACAATCCCGACAAGGAGCGCGTGCGCAAAAAGGGCAAGCATTGGGAAATA
ACGGCAGCAACTCCGCCACTCATCCAGCACAAAGAGGCCCAGTTTGGTGC
CATTGGCTGAGTCGGCTGCGTTACAGATTGATTACATGCAAAGAGTAAAG
GAGGTTCGCATTCAGCAGGCTGACAGCGGCTGGCCAGGCTAAAGACTCTC
GACTCCGACTTGGCTGCCCGAGGAATCGATTGTGAAACTAGGAATCCCTC
CGCACTACCGTGATCCCCAGGACCTTTTCTCATCGAAGGCAGGCAAAGGC
CAGCGAAGCGAATGAAGTGCAGGATCCCACCTGTTCAGAACGAGGGATCG
CTCCGCCAGTGGCATTCATTACCACGGGTGG
FMO10423.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:12:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3773-RA | 1247 | CG3773-RA | 51..1127 | 1..1072 | 4850 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:12:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 19229711..19230429 | 132..851 | 3460 | 99 | Plus |
| 3R | 32079331 | 3R | 19229513..19229643 | 1..131 | 640 | 99.2 | Plus |
| 3R | 32079331 | 3R | 19230483..19230712 | 849..1072 | 515 | 90.5 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:12:12 has no hits.
FMO10423.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-12-01 09:52:58 Download gff for
FMO10423.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3773-RA | 21..1103 | 1..1081 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:22:14 Download gff for
FMO10423.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3773-RA | 21..1103 | 1..1081 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:51:09 Download gff for
FMO10423.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3773-RA | 51..1133 | 1..1081 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:51:09 Download gff for
FMO10423.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 19229513..19229643 | 1..131 | 99 | -> | Plus |
| 3R | 19229711..19230428 | 132..850 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:22:14 Download gff for
FMO10423.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 15055235..15055365 | 1..131 | 99 | -> | Plus |
| arm_3R | 15055433..15056150 | 132..850 | 99 | -> | Plus |
