FMO10430.5prime Sequence
521 bp (521 high quality bases) assembled on 2010-11-30
> FMO10430.5prime
CAGTCGACATGAAGCTAACACTGCGACGCTACTCCTGGGTGCTCCTGTTC
CAGTTCGCCCTTTTGGGAGTGGACCTCTTTTGCAACGCCTTTGGTCCTTC
GCTGGCCAGAAACCGATTGCAGACAGCCATAATTCTCTTTGTCACTCAGG
ATGCCCTGATTATCGCGGAGTACCTGCTGTTCACCCTCGCCCTGCACTCG
ACGTGTGTGTACCAGGTCGGCGCCTCGCACATAATCCTGCGGAATTGCAA
GCTCTTCATGGCCAGCATTACCATCTACTTCCTTCTGTCCGCCTCCCAGC
ACTTTTGGATCATCTACCAATACCGTCAGCCGCCAGAAGAGGACGGTCAT
CATTGGCCACTGGGTCTGATTGCCCTATCAGTGGCACAGCGCATCATGTC
GGTTTTCTATTACTACAGCTCCTTGTCGACGGCTCTGACCATGGCAGATC
CTCGCTTCAAGGAGGAGCATCTTGACTGGATCGCAGATCAGCTGGGCGAT
AAGGCAAGCTTTCTAGACCAT
FMO10430.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:12:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13999-RA | 1041 | CG13999-RA | 241..736 | 8..503 | 2450 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:12:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5955781..5956034 | 396..143 | 1270 | 100 | Minus |
| 2L | 23513712 | 2L | 5956092..5956226 | 142..8 | 675 | 100 | Minus |
| 2L | 23513712 | 2L | 5955617..5955723 | 503..397 | 505 | 98.1 | Minus |
Blast to na_te.dros performed on 2014-11-26 17:12:35 has no hits.
FMO10430.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-12-01 09:53:03 Download gff for
FMO10430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13999-RA | 219..724 | 1..508 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:22:30 Download gff for
FMO10430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13999-RA | 235..740 | 1..508 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:51:21 Download gff for
FMO10430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13999-RA | 235..740 | 1..508 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:51:21 Download gff for
FMO10430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5955781..5956034 | 143..396 | 100 | <- | Minus |
| 2L | 5956092..5956232 | 1..142 | 97 | | Minus |
| 2L | 5955613..5955723 | 397..508 | 96 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:22:30 Download gff for
FMO10430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5955781..5956034 | 143..396 | 100 | <- | Minus |
| arm_2L | 5956092..5956232 | 1..142 | 97 | | Minus |
| arm_2L | 5955613..5955723 | 397..508 | 96 | <- | Minus |
