FMO10457.5prime Sequence
466 bp (466 high quality bases) assembled on 2010-11-30
> FMO10457.5prime
CAGTCGACATGAAGTGGCTTGTGTTATTTGTAATAACCCTTGGCTTAGGA
TTAGCCACACCCAATTCGACCTACAATCATTATCGCCTGCCGACGGCACT
TCGACCTATCAAGTATGACCTGCACGTGCTAACCCAGCTGGAATATGCTG
ATGATTTTAGTTTTAACGGAAGTGTGAAAATCCAAATCCAAGTCTTGGAA
AACACCAACAACATAACTTTGCATTCGAAGGAACTGACGATCGATGAGAC
GGCAACCACTCTTCGCCAAATTACCGGAGAGGATCTAAAGAATAACTGCG
TGTCCTCCACAGAGACCGATTGCGGGGATACTACCGCAGCTCCTACGTGG
ATCCTGTGGCCAATGAGACCAGGTGTGGACTGGCGATTACTCGAAGAAGA
AAACAGATATTTAATCCTTGTATGTTTTTTGACTTAGCAATATGCCCGGC
AAGCTTTCTAGACCAT
FMO10457.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:12:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31427-RF | 1127 | CG31427-RF | 101..406 | 9..314 | 1530 | 100 | Plus |
CG31427-RE | 1076 | CG31427-RE | 101..406 | 9..314 | 1530 | 100 | Plus |
CG31427-RD | 1152 | CG31427-RD | 71..376 | 9..314 | 1530 | 100 | Plus |
CG31427-RF | 1127 | CG31427-RF | 505..641 | 313..448 | 600 | 96.4 | Plus |
CG31427-RE | 1076 | CG31427-RE | 505..641 | 313..448 | 600 | 96.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:12:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 29239662..29239967 | 314..9 | 1530 | 100 | Minus |
3R | 32079331 | 3R | 29239427..29239563 | 448..313 | 575 | 96.4 | Minus |
3R | 32079331 | 3R | 29237857..29237998 | 280..139 | 290 | 80.3 | Minus |
Blast to na_te.dros performed on 2014-11-26 17:12:51 has no hits.
FMO10457.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-12-01 09:53:06 Download gff for
FMO10457.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31427-RB | 97..547 | 1..454 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:22:41 Download gff for
FMO10457.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31427-RD | 67..376 | 1..314 | 98 | -> | Plus |
CG31427-RD | 477..617 | 315..454 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:51:32 Download gff for
FMO10457.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31427-RD | 67..376 | 1..314 | 98 | -> | Plus |
CG31427-RD | 477..617 | 315..454 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:51:32 Download gff for
FMO10457.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 29239421..29239561 | 315..454 | 95 | <- | Minus |
3R | 29239662..29239971 | 1..314 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:22:41 Download gff for
FMO10457.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 25065143..25065283 | 315..454 | 95 | <- | Minus |
arm_3R | 25065384..25065693 | 1..314 | 98 | | Minus |