Clone FMO10457 Report

Search the DGRC for FMO10457

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:104
Well:57
Vector:pMK33-CFH-BD
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10457.5prime Sequence

466 bp (466 high quality bases) assembled on 2010-11-30

> FMO10457.5prime
CAGTCGACATGAAGTGGCTTGTGTTATTTGTAATAACCCTTGGCTTAGGA
TTAGCCACACCCAATTCGACCTACAATCATTATCGCCTGCCGACGGCACT
TCGACCTATCAAGTATGACCTGCACGTGCTAACCCAGCTGGAATATGCTG
ATGATTTTAGTTTTAACGGAAGTGTGAAAATCCAAATCCAAGTCTTGGAA
AACACCAACAACATAACTTTGCATTCGAAGGAACTGACGATCGATGAGAC
GGCAACCACTCTTCGCCAAATTACCGGAGAGGATCTAAAGAATAACTGCG
TGTCCTCCACAGAGACCGATTGCGGGGATACTACCGCAGCTCCTACGTGG
ATCCTGTGGCCAATGAGACCAGGTGTGGACTGGCGATTACTCGAAGAAGA
AAACAGATATTTAATCCTTGTATGTTTTTTGACTTAGCAATATGCCCGGC
AAGCTTTCTAGACCAT

FMO10457.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:12:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG31427-RF 1127 CG31427-RF 101..406 9..314 1530 100 Plus
CG31427-RE 1076 CG31427-RE 101..406 9..314 1530 100 Plus
CG31427-RD 1152 CG31427-RD 71..376 9..314 1530 100 Plus
CG31427-RF 1127 CG31427-RF 505..641 313..448 600 96.4 Plus
CG31427-RE 1076 CG31427-RE 505..641 313..448 600 96.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:12:50
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29239662..29239967 314..9 1530 100 Minus
3R 32079331 3R 29239427..29239563 448..313 575 96.4 Minus
3R 32079331 3R 29237857..29237998 280..139 290 80.3 Minus
Blast to na_te.dros performed on 2014-11-26 17:12:51 has no hits.

FMO10457.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-12-01 09:53:06 Download gff for FMO10457.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31427-RB 97..547 1..454 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:22:41 Download gff for FMO10457.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31427-RD 67..376 1..314 98 -> Plus
CG31427-RD 477..617 315..454 95   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:51:32 Download gff for FMO10457.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31427-RD 67..376 1..314 98 -> Plus
CG31427-RD 477..617 315..454 95   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:51:32 Download gff for FMO10457.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 29239421..29239561 315..454 95 <- Minus
3R 29239662..29239971 1..314 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:22:41 Download gff for FMO10457.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25065143..25065283 315..454 95 <- Minus
arm_3R 25065384..25065693 1..314 98   Minus