FMO10464.5prime Sequence
1137 bp (1012 high quality bases) assembled on 2010-11-30
> FMO10464.5prime
CAGTCGACATGTTTTTGGAAGTCCTGTTCGCTGCTCCACTTGTGATTTTC
ATTTTTCGCAAGTTATGGGCTCATTTGAATAGGACCTATTTCATCCTGAG
TCTTTGCAAACGAATTCGAACAGAAGACGGTAGTTTGTTGGAAAGTAAAA
TTTACGTAGCGCCGAGCAAAACCCGATTTGGAAACAACTTTGACCTCGTA
AACTTTACATCTGAAAGCATATTTAACTTCATGAGAGATGCATCTGCAAA
AGCGAAAGGTCGAAACTATCTATGGTATTTTTTCCATGCACCCATGTATA
ATATTGTTCGGGCCGAGGAAGCCGAGGAGATATTGCAAAGTTCCAAGCTT
ATTACCAAAAATATGATCTACGAGCTTTTGAAACCGTTTTTGGGCGAAGG
ACTGCTGATTAGCACAGATCAGAAATGTTTCTCTAGAAGAAAAGCCCTGA
CTCCTGCTTTTCACTTTAAGGTGCTGCAATCTTTTCTGATCATATTCAAA
GAAGAGTGCAATAAACTTGTGAAAGTCCTGCATCAAAGTGTGAATATGGA
GTTGGAGCTCAATCAGGTTATTCCTCAGTTTACGCTAAACAATGTTTGCG
AAACCGCACTGGGAGTAAAACTTGATGACTTGTCGGAGGGTATTCGATAT
CGCCAGTCGATTCACGCCATTGAAGAAGTTATGCAGCAGCGCTTATGCAA
TCCGTTCTTCTATAACATTGTGTATTTCTTTCTATTCGGCGACTATCGAA
AGCAGGTGAATAATTTGAAGATAGCCCACGAGTTTTCCAGTAACATCATA
GAGAAAAGGAGGAGCCTCTTCAAAGCAACCAGCTTGGTCAAGAGGATGAA
TTTGGCAAGAAGCAGCGATACGCCATGCTTGATACCCTGTTAGCAGCCGA
AGCAGATGGTCAGATCGATCATCAGGTATCTGCGATGAGTCAATACCTTT
ATGTTCGAGGGATACGATACTACGTCCACCTGTCTAATATTTACCCTATG
ATGCTGGCACTCCCACGAGATGTTCAGAAGAGTGCTATGAGGAGATCAAA
TACCTTCCCGAATGAATAGCGACGAAATCATGTGTTTCAGTTATTGACTG
GTCTATATGATGTGTGATCAGGATTCTCTTTCGCGTT
FMO10464.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:12:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cyp4ac2-RB | 1709 | CG17970-RB | 41..1171 | 9..1130 | 5200 | 98.1 | Plus |
Cyp4ac1-RA | 1666 | CG14032-RA | 183..1118 | 161..1092 | 1120 | 76 | Plus |
Cyp4ac3-RA | 1606 | CG14031-RA | 871..1034 | 833..994 | 440 | 85.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:12:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 5267378..5267844 | 600..1061 | 1995 | 97.6 | Plus |
2L | 23513712 | 2L | 5266432..5266636 | 9..213 | 1025 | 100 | Plus |
2L | 23513712 | 2L | 5266694..5266898 | 213..417 | 1025 | 100 | Plus |
2L | 23513712 | 2L | 5265101..5265321 | 845..1061 | 665 | 91 | Plus |
2L | 23513712 | 2L | 5267095..5267195 | 500..600 | 505 | 100 | Plus |
2L | 23513712 | 2L | 5269594..5269757 | 833..994 | 390 | 85.4 | Plus |
2L | 23513712 | 2L | 5266956..5267039 | 416..499 | 375 | 96.4 | Plus |
2L | 23513712 | 2L | 5264349..5264497 | 267..415 | 250 | 77.9 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:12:54 has no hits.
FMO10464.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-12-01 09:53:06 Download gff for
FMO10464.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp4ac2-RB | 34..1174 | 1..1134 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:22:42 Download gff for
FMO10464.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp4ac2-RB | 34..1174 | 1..1134 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:51:34 Download gff for
FMO10464.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp4ac2-RB | 34..1174 | 1..1134 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:51:34 Download gff for
FMO10464.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 5267095..5267195 | 500..600 | 100 | -> | Plus |
2L | 5266425..5266636 | 1..213 | 98 | -> | Plus |
2L | 5266695..5266898 | 214..417 | 100 | -> | Plus |
2L | 5266958..5267039 | 418..499 | 96 | -> | Plus |
2L | 5267379..5267920 | 601..1134 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:22:42 Download gff for
FMO10464.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 5266425..5266636 | 1..213 | 98 | -> | Plus |
arm_2L | 5266695..5266898 | 214..417 | 100 | -> | Plus |
arm_2L | 5266958..5267039 | 418..499 | 96 | -> | Plus |
arm_2L | 5267095..5267195 | 500..600 | 100 | -> | Plus |
arm_2L | 5267379..5267920 | 601..1134 | 96 | | Plus |