Clone FMO10464 Report

Search the DGRC for FMO10464

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:104
Well:64
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCyp4ac2-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10464.5prime Sequence

1137 bp (1012 high quality bases) assembled on 2010-11-30

> FMO10464.5prime
CAGTCGACATGTTTTTGGAAGTCCTGTTCGCTGCTCCACTTGTGATTTTC
ATTTTTCGCAAGTTATGGGCTCATTTGAATAGGACCTATTTCATCCTGAG
TCTTTGCAAACGAATTCGAACAGAAGACGGTAGTTTGTTGGAAAGTAAAA
TTTACGTAGCGCCGAGCAAAACCCGATTTGGAAACAACTTTGACCTCGTA
AACTTTACATCTGAAAGCATATTTAACTTCATGAGAGATGCATCTGCAAA
AGCGAAAGGTCGAAACTATCTATGGTATTTTTTCCATGCACCCATGTATA
ATATTGTTCGGGCCGAGGAAGCCGAGGAGATATTGCAAAGTTCCAAGCTT
ATTACCAAAAATATGATCTACGAGCTTTTGAAACCGTTTTTGGGCGAAGG
ACTGCTGATTAGCACAGATCAGAAATGTTTCTCTAGAAGAAAAGCCCTGA
CTCCTGCTTTTCACTTTAAGGTGCTGCAATCTTTTCTGATCATATTCAAA
GAAGAGTGCAATAAACTTGTGAAAGTCCTGCATCAAAGTGTGAATATGGA
GTTGGAGCTCAATCAGGTTATTCCTCAGTTTACGCTAAACAATGTTTGCG
AAACCGCACTGGGAGTAAAACTTGATGACTTGTCGGAGGGTATTCGATAT
CGCCAGTCGATTCACGCCATTGAAGAAGTTATGCAGCAGCGCTTATGCAA
TCCGTTCTTCTATAACATTGTGTATTTCTTTCTATTCGGCGACTATCGAA
AGCAGGTGAATAATTTGAAGATAGCCCACGAGTTTTCCAGTAACATCATA
GAGAAAAGGAGGAGCCTCTTCAAAGCAACCAGCTTGGTCAAGAGGATGAA
TTTGGCAAGAAGCAGCGATACGCCATGCTTGATACCCTGTTAGCAGCCGA
AGCAGATGGTCAGATCGATCATCAGGTATCTGCGATGAGTCAATACCTTT
ATGTTCGAGGGATACGATACTACGTCCACCTGTCTAATATTTACCCTATG
ATGCTGGCACTCCCACGAGATGTTCAGAAGAGTGCTATGAGGAGATCAAA
TACCTTCCCGAATGAATAGCGACGAAATCATGTGTTTCAGTTATTGACTG
GTCTATATGATGTGTGATCAGGATTCTCTTTCGCGTT

FMO10464.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:12:55
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp4ac2-RB 1709 CG17970-RB 41..1171 9..1130 5200 98.1 Plus
Cyp4ac1-RA 1666 CG14032-RA 183..1118 161..1092 1120 76 Plus
Cyp4ac3-RA 1606 CG14031-RA 871..1034 833..994 440 85.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:12:53
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5267378..5267844 600..1061 1995 97.6 Plus
2L 23513712 2L 5266432..5266636 9..213 1025 100 Plus
2L 23513712 2L 5266694..5266898 213..417 1025 100 Plus
2L 23513712 2L 5265101..5265321 845..1061 665 91 Plus
2L 23513712 2L 5267095..5267195 500..600 505 100 Plus
2L 23513712 2L 5269594..5269757 833..994 390 85.4 Plus
2L 23513712 2L 5266956..5267039 416..499 375 96.4 Plus
2L 23513712 2L 5264349..5264497 267..415 250 77.9 Plus
Blast to na_te.dros performed on 2014-11-26 17:12:54 has no hits.

FMO10464.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-12-01 09:53:06 Download gff for FMO10464.5prime
Subject Subject Range Query Range Percent Splice Strand
Cyp4ac2-RB 34..1174 1..1134 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:22:42 Download gff for FMO10464.5prime
Subject Subject Range Query Range Percent Splice Strand
Cyp4ac2-RB 34..1174 1..1134 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:51:34 Download gff for FMO10464.5prime
Subject Subject Range Query Range Percent Splice Strand
Cyp4ac2-RB 34..1174 1..1134 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:51:34 Download gff for FMO10464.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 5267095..5267195 500..600 100 -> Plus
2L 5266425..5266636 1..213 98 -> Plus
2L 5266695..5266898 214..417 100 -> Plus
2L 5266958..5267039 418..499 96 -> Plus
2L 5267379..5267920 601..1134 96   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:22:42 Download gff for FMO10464.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 5266425..5266636 1..213 98 -> Plus
arm_2L 5266695..5266898 214..417 100 -> Plus
arm_2L 5266958..5267039 418..499 96 -> Plus
arm_2L 5267095..5267195 500..600 100 -> Plus
arm_2L 5267379..5267920 601..1134 96   Plus