FMO10466.5prime Sequence
1085 bp (990 high quality bases) assembled on 2010-11-30
> FMO10466.5prime
CAGTCGACATGTCGGAAAAAGATCTGGATGCGATTATTTTGGAGACCCAA
AAGGTTTTGGGCAAGTACATCAAAAAGCCACCGCTCACGGAGAAGCTGCT
GAAGAAGCCGCCATTCCGATTTCTAATGGATGTCTTTAGTAACTTTATCA
AGCAAAGTGGCACATTTGATGGATTATACACGCCGGAAGAGCAGATGTTC
GAGAACATAACCAGTCGGGAGGATAAGATTCGATTTCTGCAGAAGATGAT
CGATGCAACCAAACTAACAACCAAACTGGATCTCAAAGTACGCACTTCAA
AAATAGTTGCTGGCCAGGAACCGGAGCTCACCAATGAGCTCCTCCAGGCG
ATGGCCAGTGTTGCGGAAAAGAACTTGGAGTGGGACAGCATTGTGGATCA
GGTGGTGATTTCCCACAGCAATATTTTTTCTGACGCTTACCAAGCCACCG
AAGGAAACTAAAAATTCAAGCAAAAATCCCTCACCCGCCGGCAAGGATGA
GGATGCAAAGCGACGCAAGGAGAAACGTATATCGCCTCAAGAGCAGAAGC
TGCGCAAGGTCAAAGAACAGGTGTCCCGTTCTACTCCCCCCACCGAGAAG
GATAAAGCATCCCAGAAGAAGTCCAAGGCACCCAAGGATGAGACGAAGTT
AAGTCGACAAAACTCGAAGCAAAAGAGTCCGTCACCAGTTAAGCAGAAGT
CCAAAGCCAAACTGCAGCCTTCAACAGAGAGCGATAATCTTAGCCAGTCT
ATGTCGCCAGTGGAAGAAGGATCAACCAAGCCTGCTGCAAGCGAAAGTGC
TCCAAGCAAACCAGAGCCGGAAATGGTTCCTCCATTAAAAGAGAAGAGCA
GTGGTGAGACCTGTCCAGGAAACTCCAACTGCCCCCACCAGCTGAGCTGA
GAGTCGCAAATCCTCTAGCAGAAGTCGCCGTCTAGTGCAGCCACAGCAAC
GGAACCTAATCCCATTCCCATGAGAGCAATCCCAGCCAGCGTTGCAGTCG
TCAGAAACAGCTCCTCCACGGAGACAACAGCGGCGAACGATCGGGAGTCC
CTCACAGAAAGAACTCTAAAGAATGATCACGCAGA
FMO10466.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:13:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3259-RA | 1843 | CG3259-RA | 29..1108 | 9..1073 | 4735 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:13:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 14302832..14303396 | 262..827 | 2690 | 98.8 | Plus |
| 3R | 32079331 | 3R | 14302456..14302590 | 9..143 | 675 | 100 | Plus |
| 3R | 32079331 | 3R | 14302655..14302772 | 144..261 | 590 | 100 | Plus |
| 3R | 32079331 | 3R | 14303459..14303650 | 825..1008 | 460 | 92.2 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:13:01 has no hits.
FMO10466.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-12-01 09:53:08 Download gff for
FMO10466.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3259-RA | 1..1055 | 9..1051 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:22:47 Download gff for
FMO10466.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3259-RA | 29..1083 | 9..1051 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:51:38 Download gff for
FMO10466.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3259-RA | 29..1083 | 9..1051 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:51:38 Download gff for
FMO10466.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 14302456..14302590 | 9..143 | 100 | -> | Plus |
| 3R | 14302655..14302772 | 144..261 | 100 | -> | Plus |
| 3R | 14302832..14303394 | 262..825 | 98 | -> | Plus |
| 3R | 14303460..14303693 | 826..1047 | 91 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:22:47 Download gff for
FMO10466.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 10128178..10128312 | 9..143 | 100 | -> | Plus |
| arm_3R | 10128377..10128494 | 144..261 | 100 | -> | Plus |
| arm_3R | 10128554..10129116 | 262..825 | 98 | -> | Plus |
| arm_3R | 10129182..10129415 | 826..1047 | 91 | | Plus |
