Clone FMO10469 Report

Search the DGRC for FMO10469

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:104
Well:69
Vector:pMK33-CFH-BD
Associated Gene/TranscriptSug-RE
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10469.5prime Sequence

1100 bp (997 high quality bases) assembled on 2010-11-30

> FMO10469.5prime
CAGTCGACATGAAGGCCACCATCGATAAGGAGCTGCTGCCCATGAAGGCG
CACTACTTTCTCTTCAACGCCGGCACCGCTCCCGTCGTCCCCTTCATGCC
CACTCTGGCCGGCCAATTGGGCTACTCCCCCGCCGTTGTGGGCACCATGT
ACACTATCCTTCCCATCATCGGAATGCTGGCGAAGCCCCTCTTTGGATAC
ATTGCGGACCGGTACCATCGCCATCGACCCCTATTTCTGGGTGGCCAGGT
CCTCACGGGCATCGCCTTTTTCCTCATCATGTTCGTGCCGGGAATGGAGA
AGCCGTTGCCCAAGGTCGAGTTCCACTGCCACCAGGGTGTATCCGACATT
CCGAGATTCTGCTCGGAGTACGGCGAGTGCGTGGAGAGAAATCTTGAGCG
GTACTACGGGAACAGGACGTTGGAGTTTTTTCTGAACTGCGAGGCACAGC
CCTTCATGTGGGACATAGTGTGTGAAGATTGGCTAAAGAACAACACGGAA
AACTGTGCCGCCAATCGAACCAATACCCAGATGGAATTCGGAGCCAGCAT
AACTATGCAAAAGATTGAGAATGATGGCAGCTGCATGTTCTTCATGATTC
CGCACGATCAAGGCCAGATTGCAGGCCAGAATGTCACGTTGTACTGCCCG
AAGGAGAAGGAGTACTTCAAATCCAATTGCACCATGGACTGTCGTGAGGA
CTATCTCAAGGAGCAGCTGGCGGAGAGTGCTGTGATTAACACGAGTAGTG
CCGTAACCATGCCGCAGTTTTGGCTGTTCTTTGGCCTGCTCATCTTCAGC
TGGATCGGCATGGCGGTGGTGGTCAGCATTGGTGACGCCATATGCTTTGG
CATCCTCGGCGATCGTCATCACCTGTACGCAAACAGCGCCTGTGCGGCTC
CCTTGGATGGGGAGTTTTGCCTCTTGGCCGGCCTCTTGTGGATCACATGT
CATTGGGTGAGGTGAACAAGAACTACACGCCGTGTTCTGGATGGCTTGCT
TATCATGGGAATTTGAATGTGTTCGCATCATTCAAGCCTGAGGCCCCACC
CCACACAGTTTTCGTCATATTTGAAAGATGTGGGTCGAATGTTCTTCGTG

FMO10469.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:13:05
Subject Length Description Subject Range Query Range Score Percent Strand
Sug-RF 3349 CG7334-RF 599..1693 5..1093 4975 97.6 Plus
Sug-RC 2782 CG7334-RC 599..1693 5..1093 4975 97.6 Plus
Sug-RE 3343 CG7334-RE 599..1693 5..1093 4975 97.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:13:03
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 11686724..11687554 211..1037 3715 98.1 Plus
3L 28110227 3L 11686069..11686211 72..214 715 100 Plus
3L 28110227 3L 11684578..11684648 5..75 340 98.6 Plus
Blast to na_te.dros performed on 2014-11-26 17:13:05 has no hits.

FMO10469.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-12-01 09:53:08 Download gff for FMO10469.5prime
Subject Subject Range Query Range Percent Splice Strand
Sug-RC 592..1697 1..1100 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:22:49 Download gff for FMO10469.5prime
Subject Subject Range Query Range Percent Splice Strand
Sug-RE 596..1701 1..1100 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:51:40 Download gff for FMO10469.5prime
Subject Subject Range Query Range Percent Splice Strand
Sug-RE 596..1701 1..1100 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:51:40 Download gff for FMO10469.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 11684575..11684645 1..72 95 -> Plus
3L 11686070..11686208 73..211 100 -> Plus
3L 11686725..11687559 212..1044 98 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:22:49 Download gff for FMO10469.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 11677675..11677745 1..72 95 -> Plus
arm_3L 11679170..11679308 73..211 100 -> Plus
arm_3L 11679825..11680659 212..1044 98 -> Plus