FMO10469.5prime Sequence
1100 bp (997 high quality bases) assembled on 2010-11-30
> FMO10469.5prime
CAGTCGACATGAAGGCCACCATCGATAAGGAGCTGCTGCCCATGAAGGCG
CACTACTTTCTCTTCAACGCCGGCACCGCTCCCGTCGTCCCCTTCATGCC
CACTCTGGCCGGCCAATTGGGCTACTCCCCCGCCGTTGTGGGCACCATGT
ACACTATCCTTCCCATCATCGGAATGCTGGCGAAGCCCCTCTTTGGATAC
ATTGCGGACCGGTACCATCGCCATCGACCCCTATTTCTGGGTGGCCAGGT
CCTCACGGGCATCGCCTTTTTCCTCATCATGTTCGTGCCGGGAATGGAGA
AGCCGTTGCCCAAGGTCGAGTTCCACTGCCACCAGGGTGTATCCGACATT
CCGAGATTCTGCTCGGAGTACGGCGAGTGCGTGGAGAGAAATCTTGAGCG
GTACTACGGGAACAGGACGTTGGAGTTTTTTCTGAACTGCGAGGCACAGC
CCTTCATGTGGGACATAGTGTGTGAAGATTGGCTAAAGAACAACACGGAA
AACTGTGCCGCCAATCGAACCAATACCCAGATGGAATTCGGAGCCAGCAT
AACTATGCAAAAGATTGAGAATGATGGCAGCTGCATGTTCTTCATGATTC
CGCACGATCAAGGCCAGATTGCAGGCCAGAATGTCACGTTGTACTGCCCG
AAGGAGAAGGAGTACTTCAAATCCAATTGCACCATGGACTGTCGTGAGGA
CTATCTCAAGGAGCAGCTGGCGGAGAGTGCTGTGATTAACACGAGTAGTG
CCGTAACCATGCCGCAGTTTTGGCTGTTCTTTGGCCTGCTCATCTTCAGC
TGGATCGGCATGGCGGTGGTGGTCAGCATTGGTGACGCCATATGCTTTGG
CATCCTCGGCGATCGTCATCACCTGTACGCAAACAGCGCCTGTGCGGCTC
CCTTGGATGGGGAGTTTTGCCTCTTGGCCGGCCTCTTGTGGATCACATGT
CATTGGGTGAGGTGAACAAGAACTACACGCCGTGTTCTGGATGGCTTGCT
TATCATGGGAATTTGAATGTGTTCGCATCATTCAAGCCTGAGGCCCCACC
CCACACAGTTTTCGTCATATTTGAAAGATGTGGGTCGAATGTTCTTCGTG
FMO10469.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:13:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sug-RF | 3349 | CG7334-RF | 599..1693 | 5..1093 | 4975 | 97.6 | Plus |
Sug-RC | 2782 | CG7334-RC | 599..1693 | 5..1093 | 4975 | 97.6 | Plus |
Sug-RE | 3343 | CG7334-RE | 599..1693 | 5..1093 | 4975 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:13:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 11686724..11687554 | 211..1037 | 3715 | 98.1 | Plus |
3L | 28110227 | 3L | 11686069..11686211 | 72..214 | 715 | 100 | Plus |
3L | 28110227 | 3L | 11684578..11684648 | 5..75 | 340 | 98.6 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:13:05 has no hits.
FMO10469.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-12-01 09:53:08 Download gff for
FMO10469.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sug-RC | 592..1697 | 1..1100 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:22:49 Download gff for
FMO10469.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sug-RE | 596..1701 | 1..1100 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:51:40 Download gff for
FMO10469.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sug-RE | 596..1701 | 1..1100 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:51:40 Download gff for
FMO10469.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 11684575..11684645 | 1..72 | 95 | -> | Plus |
3L | 11686070..11686208 | 73..211 | 100 | -> | Plus |
3L | 11686725..11687559 | 212..1044 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:22:49 Download gff for
FMO10469.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 11677675..11677745 | 1..72 | 95 | -> | Plus |
arm_3L | 11679170..11679308 | 73..211 | 100 | -> | Plus |
arm_3L | 11679825..11680659 | 212..1044 | 98 | -> | Plus |