FMO10502.5prime Sequence
1097 bp (1027 high quality bases) assembled on 2010-12-06
> FMO10502.5prime
CAGTCGACATGCGGAAGCTTTGTTCGAGTGAGTCAGTTTGTTCTGGAATT
GAGGTTGAAATTGAAAATAATAACAATAATCATATTCATCATGGCGAGAC
AACGTATCACATGAAAATACTGGTGCCCGCGGTGGCCTCCGGGGCCATCA
TTGGCAAAGGTGGCGAGACGATCGCCTCCCTGCAGAAGGACACGGGTGCT
AGGGTCAAGATGTCCAAGTCGCACGACTTCTACCCAGGCACCACCGAACG
CGTGTGCCTGATCACCGGCTCCACGGAGGCTATCATGGTCGTGATGGAGT
TCATCATGGACAAGATCCGCGAGAAGCCCGACCTGACCAACAAGATCGTC
GATACCGACTCAAAACAGACACAGGAGCGCGACAAGCAGGTCAAGATCCT
GGTGCCCAACTCGACCGCCGGCATGATCATTGGCAAGGGCGGTGCTTTCA
TTAAACAGATCAAGGAGGAGAGCGGCTCCTATGTCCAGATCTCGCAGAAG
CCCACGGATGTGTCGTTGCAGGAGCGCTGCATCACCATCATAGGCGACAA
GGAGAACAATAAGAACGCCTGCAAGATGATCCTCTCGAAGATCGTCGAAG
ATCCCCAGTCGGGCACCTGCCTGAACGTATCCTACGCGGACGTCAGCGGC
CCGGTGGCCAACTTTAATCCGACCGGCTCCCCGTACGCCACCAATCAGAA
TGCCATCAACTCGAGCACCGCTTCGTTGAACTCCACGTTGGGCACCACGA
TCGGCGGTGCAAACTCGGCGGCCAGCCTGCTAGTCAACGGCACCGGCATC
AATTTGTCCATCAATCTGGGCTCACCCAATCCGGCGCCCAATCTAGCGGT
TGCCACACAGCTGCTCGAGCATATTAAAGTTGCCATGCGCGGCTCTGGCT
ATTCGGAGACCGTAACGAACGAAGTTGTCGCCGCTCTGAGCGTGCTGGCC
AAGTACGGCGTCCTTGGAATGGGCGTGGGTGTGTCGCCACACCAACTGCG
CCCACTCAACGCTGGGCCAACTTCCTGGGCGTAACGACGCTGGACAGCAG
ACAGCGCTGCCGCATCTGCGGTCATCGCCAGCAATGTGTTCGGGTGC
FMO10502.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:13:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
ps-RB | 4508 | CG8144-RB | 139..1223 | 9..1093 | 5260 | 99.2 | Plus |
ps-RJ | 2558 | CG8144-RJ | 139..1223 | 9..1093 | 5260 | 99.2 | Plus |
ps-RR | 3624 | CG42670-RR | 1224..2289 | 28..1093 | 5165 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:13:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 9445252..9445898 | 235..881 | 3205 | 99.7 | Plus |
3R | 32079331 | 3R | 9445969..9446183 | 879..1093 | 840 | 96.8 | Plus |
3R | 32079331 | 3R | 9445043..9445188 | 93..238 | 730 | 100 | Plus |
3R | 32079331 | 3R | 9444011..9444077 | 28..94 | 335 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:13:28 has no hits.
FMO10502.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2010-12-06 14:06:57 Download gff for
FMO10502.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ps-RB | 132..1226 | 1..1097 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:23:04 Download gff for
FMO10502.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ps-RJ | 132..1226 | 1..1097 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:51:54 Download gff for
FMO10502.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ps-RJ | 132..1226 | 1..1097 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:51:54 Download gff for
FMO10502.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 9445969..9446186 | 879..1097 | 96 | | Plus |
3R | 9444011..9444076 | 28..93 | 100 | -> | Plus |
3R | 9445044..9445187 | 94..237 | 100 | -> | Plus |
3R | 9445255..9445895 | 238..878 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:23:04 Download gff for
FMO10502.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 5271691..5271908 | 879..1097 | 96 | | Plus |
arm_3R | 5269733..5269798 | 28..93 | 100 | -> | Plus |
arm_3R | 5270766..5270909 | 94..237 | 100 | -> | Plus |
arm_3R | 5270977..5271617 | 238..878 | 99 | -> | Plus |