FMO10512.5prime Sequence
772 bp (772 high quality bases) assembled on 2010-12-06
> FMO10512.5prime
CAGTCGACATGCGGAAGCTTTGTTCGAGTGAGTCTGTTTGTTCTGGAATT
GAGGTTGAAATTGAAAATAATAACAATAATCATATTCATCATGGCGAGAC
AACGTATCACATGAAAATACTGGTGCCCGCGGTGGCCTCCGGGGCCATCA
TTGGCAAAGGTGGCGAGACGATCGCCTCCCTGCAGAAGGACACGGGTGCT
AGGGTCAAGATGTCCAAGTCGCACGACTTCTACCCAGGCACCACCGAACG
CGTGTGCCTGATCACCGGCTCCACGGAGGCTATCATGGTCGTGATGGAGT
TCATCATGGACAAGATCCGCGAGAAGCCCGACCTGACCAACAAGATCGTC
GATACCGACTCAAAACAGACACAGGAGCGCGACAAGCAGGTCAAGATCCT
GGTGCCCAACTCGACCGCCGGCATGATCATTGGCAAGGGCGGTGCCTTCA
TTAAACAGATCAAGGAGGAGAGCGGCTCCTATGTCCAGATCTCGCAGAAG
CCCACGGATGTGTCGTTGCAGGAGCGCTGCATCACCATCATAGGCGACAA
GGAGAACAATAAGAACGCCTGCAAGATGATCCTCTCGAAGATCGTCGAAT
ATCCCCAGTCGGGCACCTGCCTGACGTATCCTACGCGGACGTCAGCGGCC
CGGTGGCCAACTTTAATCCGACCGGCTCCCCGTACGCCACCAATCAAAAT
GCCCATCAACTCGAGCACCGCTTCGTTGAACTCCACGTTTGGGCACCACG
GATCGGGCGGGTGCAAACTCGG
FMO10512.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:13:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
ps-RB | 4508 | CG8144-RB | 139..898 | 9..772 | 3630 | 98.8 | Plus |
ps-RJ | 2558 | CG8144-RJ | 139..898 | 9..772 | 3630 | 98.8 | Plus |
ps-RR | 3624 | CG42670-RR | 1224..1964 | 28..772 | 3535 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:13:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 9445252..9445766 | 235..750 | 2405 | 99 | Plus |
3R | 32079331 | 3R | 9445043..9445188 | 93..238 | 730 | 100 | Plus |
3R | 32079331 | 3R | 9444011..9444077 | 28..94 | 320 | 98.5 | Plus |
Blast to na_te.dros performed 2014-11-26 17:13:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Idefix | 7411 | Idefix DME9736 7411bp Derived from AJ009736 (e1371475) (Rel. 58, Last updated, Version 1). | 6718..6751 | 61..94 | 107 | 79.4 | Plus |
FMO10512.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2010-12-06 14:06:55 Download gff for
FMO10512.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ps-RB | 132..898 | 1..772 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:23:00 Download gff for
FMO10512.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ps-RJ | 132..898 | 1..772 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:51:50 Download gff for
FMO10512.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ps-RJ | 132..898 | 1..772 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:51:50 Download gff for
FMO10512.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 9445044..9445187 | 94..237 | 100 | -> | Plus |
3R | 9444011..9444076 | 28..93 | 98 | -> | Plus |
3R | 9445255..9445785 | 238..772 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:23:00 Download gff for
FMO10512.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 5270766..5270909 | 94..237 | 100 | -> | Plus |
arm_3R | 5269733..5269798 | 28..93 | 98 | -> | Plus |
arm_3R | 5270977..5271507 | 238..772 | 98 | | Plus |