FMO10582.5prime Sequence
523 bp (432 high quality bases) assembled on 2010-12-06
> FMO10582.5prime
CAGTCGACATGAAATATCCATTTGTGAACGTTCGCCTGCCGCCCGAGGAA
ACCGTTGAGGTGGCCGCACCGATCTTCGAGGAGGGCATGGAAGTGGAGGT
GTTCACGCGCACGAACGATCGGGAAACCTGCGGCTGGTGGGTGGGCATTA
TTAAAATGCGCAAAGCGGAAATCTATGCGGTCGCGTACATCGGTTTTGAG
ACGTCCTACACCGAAATCTGTGAATTGGGTCGTCTGCGCGCCAAAAACTC
GAATCCGCCAATTACAGCCAAGACCTTCTACCAGTTCACGCTGCCCGTGC
CCGAGGAGTTGCGCGAAGAAGCCCAGAAGGATGGTATACACAAGGAGTTT
CAGCGCACAATCGATGCCGGCGTGTGCAACTACAGTCGCGATCTGGACGC
CCTGATTGTCATCTCCAAGTTTGAGCACACTCAGAAGCGAGCCAGTATGC
TCAAGGATATGCATTTTCGTAATCTCTCACAAAAGGTTATGCTGTTGAAA
AGGACTGAAGAAGCTGCCCGTCA
FMO10582.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:16:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Fmr1-RI | 3752 | CG6203-RI | 177..691 | 9..523 | 2575 | 100 | Plus |
Fmr1-RH | 2266 | CG6203-RH | 683..1197 | 9..523 | 2575 | 100 | Plus |
Fmr1-RG | 4426 | CG6203-RG | 683..1197 | 9..523 | 2575 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:16:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 10105790..10106100 | 319..9 | 1555 | 100 | Minus |
3R | 32079331 | 3R | 10105557..10105724 | 487..320 | 840 | 100 | Minus |
3R | 32079331 | 3R | 10105464..10105505 | 523..482 | 210 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 17:16:24 has no hits.
FMO10582.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2010-12-06 14:07:46 Download gff for
FMO10582.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fmr1-RE | 141..659 | 2..522 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:25:19 Download gff for
FMO10582.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fmr1-RG | 678..1196 | 2..522 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:54:17 Download gff for
FMO10582.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fmr1-RG | 678..1196 | 2..522 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:54:17 Download gff for
FMO10582.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 10105465..10105501 | 486..522 | 100 | <- | Minus |
3R | 10105559..10105724 | 320..485 | 100 | <- | Minus |
3R | 10105790..10106103 | 2..319 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:25:19 Download gff for
FMO10582.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 5931512..5931825 | 2..319 | 98 | | Minus |
arm_3R | 5931187..5931223 | 486..522 | 100 | <- | Minus |
arm_3R | 5931281..5931446 | 320..485 | 100 | <- | Minus |