Clone FMO10603 Report

Search the DGRC for FMO10603

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:106
Well:3
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG17324-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10603.5prime Sequence

1101 bp (990 high quality bases) assembled on 2011-06-24

> FMO10603.5prime
CACTCGACATGAAGTTGCTACCTCTGGCTTTATTATCCTTTTTATTAAGA
CCGAAACCCAATGACGCGGCGCACATTTTGGGCTTGTTTCAACATCCCGG
AAAGAGCCACTTTGACTTCTTCCGTCCCATGTTCTTGGCCTTGGCGGAGA
GGGGTCACAACATTAGCATGTATAGCTATTTTCCACTGGAGAAACCAGTG
GCCAACTACACGGATTACGTCTTTCAAGGAATGCCCTTGCTCACCGATAT
TGTGGACTTAAGTAACTTTGAATCCGAATGGAAGCCCCTGGGACTGCCGT
TCAAGGTGCCCACCTACTTTATGCTTCACGATTGGGGTCTGCGATCCTGT
AAGGTGGCCCTGAACTCACCCCTCATCACCCAACTGCTCAAGTCCCCCAT
TCGATATGACGTCATACTCCTGGAACACTTCTCCAACGATTGCATGGCAG
CGGTGGCCCACCTATTGAATGCACCTGTAATCGCATTGAGTAGCTGTGCG
ATAATGCCGTGGCACTACAAACGCATGGGAAGTCCGTTCATTAACCCCAT
TATGCCCATGAATTTCCTGCCCTACACTGATGAGATGAGTCTGATCGATC
GACTGAATAATTTCTTTCATTTCCACACCGTTAATACTCTGTACAACATG
ATTACCCAACCAGCCACCGATGCCCTGATCGCTGAGAGATTTGGACCCGG
TCTGCCGCCCATCAATGAGATCGTGAAGAATACGAGTCTGATGCTGATCA
ATCAGCATTACGCCCTAACCGGACCACGCCCCTATGCTCCGAATGTGATT
GAAGTGGGTGGGCTGCAAGTGGGGCCGATAAAACCACTTCCACAACACCT
GCTAGATCCTCTGGATCGATCTCCCAATGGAGTAATCTATATCAGCTGGG
GCTCCATGGTAAACAGCAATACCCTTCCTTCGAGCAAGCGAAGTGCGCTT
TTCAAAGCATTTCCCAACTTAAGATACACTTGTAATGCGCTAGAAAAGGT
TAGATCTCTGGAAGATAACAGCCTCGACCTCTACACTTTCGACTGCTGCT
AAAGAAGATCTTTGTGTTCCCCTAGATATGCCTTTAATTTCCATGCGACT
T

FMO10603.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:43:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG17324-RB 1680 CG17324-RB 78..1143 9..1063 4930 98.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:43:32
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18820570..18820952 264..646 1915 100 Plus
2L 23513712 2L 18820256..18820510 9..263 1260 99.6 Plus
2L 23513712 2L 18821012..18821214 643..845 1000 99.5 Plus
2L 23513712 2L 18821723..18821901 846..1018 580 92.2 Plus
Blast to na_te.dros performed on 2014-11-26 23:43:34 has no hits.

FMO10603.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:42:47 Download gff for FMO10603.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17324-RB 73..1143 1..1063 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:00:46 Download gff for FMO10603.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17324-RB 73..1143 1..1063 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:50:16 Download gff for FMO10603.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17324-RB 73..1143 1..1063 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:50:16 Download gff for FMO10603.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 18821723..18821951 846..1063 91   Plus
2L 18820251..18820510 1..263 98 -> Plus
2L 18820570..18820952 264..646 100 -> Plus
2L 18821016..18821214 647..845 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:00:46 Download gff for FMO10603.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 18821016..18821214 647..845 100 -> Plus
arm_2L 18820251..18820510 1..263 98 -> Plus
arm_2L 18820570..18820952 264..646 100 -> Plus
arm_2L 18821723..18821951 846..1063 91   Plus