FMO10603.5prime Sequence
1101 bp (990 high quality bases) assembled on 2011-06-24
> FMO10603.5prime
CACTCGACATGAAGTTGCTACCTCTGGCTTTATTATCCTTTTTATTAAGA
CCGAAACCCAATGACGCGGCGCACATTTTGGGCTTGTTTCAACATCCCGG
AAAGAGCCACTTTGACTTCTTCCGTCCCATGTTCTTGGCCTTGGCGGAGA
GGGGTCACAACATTAGCATGTATAGCTATTTTCCACTGGAGAAACCAGTG
GCCAACTACACGGATTACGTCTTTCAAGGAATGCCCTTGCTCACCGATAT
TGTGGACTTAAGTAACTTTGAATCCGAATGGAAGCCCCTGGGACTGCCGT
TCAAGGTGCCCACCTACTTTATGCTTCACGATTGGGGTCTGCGATCCTGT
AAGGTGGCCCTGAACTCACCCCTCATCACCCAACTGCTCAAGTCCCCCAT
TCGATATGACGTCATACTCCTGGAACACTTCTCCAACGATTGCATGGCAG
CGGTGGCCCACCTATTGAATGCACCTGTAATCGCATTGAGTAGCTGTGCG
ATAATGCCGTGGCACTACAAACGCATGGGAAGTCCGTTCATTAACCCCAT
TATGCCCATGAATTTCCTGCCCTACACTGATGAGATGAGTCTGATCGATC
GACTGAATAATTTCTTTCATTTCCACACCGTTAATACTCTGTACAACATG
ATTACCCAACCAGCCACCGATGCCCTGATCGCTGAGAGATTTGGACCCGG
TCTGCCGCCCATCAATGAGATCGTGAAGAATACGAGTCTGATGCTGATCA
ATCAGCATTACGCCCTAACCGGACCACGCCCCTATGCTCCGAATGTGATT
GAAGTGGGTGGGCTGCAAGTGGGGCCGATAAAACCACTTCCACAACACCT
GCTAGATCCTCTGGATCGATCTCCCAATGGAGTAATCTATATCAGCTGGG
GCTCCATGGTAAACAGCAATACCCTTCCTTCGAGCAAGCGAAGTGCGCTT
TTCAAAGCATTTCCCAACTTAAGATACACTTGTAATGCGCTAGAAAAGGT
TAGATCTCTGGAAGATAACAGCCTCGACCTCTACACTTTCGACTGCTGCT
AAAGAAGATCTTTGTGTTCCCCTAGATATGCCTTTAATTTCCATGCGACT
T
FMO10603.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:43:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17324-RB | 1680 | CG17324-RB | 78..1143 | 9..1063 | 4930 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:43:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 18820570..18820952 | 264..646 | 1915 | 100 | Plus |
2L | 23513712 | 2L | 18820256..18820510 | 9..263 | 1260 | 99.6 | Plus |
2L | 23513712 | 2L | 18821012..18821214 | 643..845 | 1000 | 99.5 | Plus |
2L | 23513712 | 2L | 18821723..18821901 | 846..1018 | 580 | 92.2 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:43:34 has no hits.
FMO10603.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:42:47 Download gff for
FMO10603.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17324-RB | 73..1143 | 1..1063 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:00:46 Download gff for
FMO10603.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17324-RB | 73..1143 | 1..1063 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:50:16 Download gff for
FMO10603.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17324-RB | 73..1143 | 1..1063 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:50:16 Download gff for
FMO10603.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 18821723..18821951 | 846..1063 | 91 | | Plus |
2L | 18820251..18820510 | 1..263 | 98 | -> | Plus |
2L | 18820570..18820952 | 264..646 | 100 | -> | Plus |
2L | 18821016..18821214 | 647..845 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:00:46 Download gff for
FMO10603.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 18821016..18821214 | 647..845 | 100 | -> | Plus |
arm_2L | 18820251..18820510 | 1..263 | 98 | -> | Plus |
arm_2L | 18820570..18820952 | 264..646 | 100 | -> | Plus |
arm_2L | 18821723..18821951 | 846..1063 | 91 | | Plus |