FMO10604.5prime Sequence
1160 bp (1021 high quality bases) assembled on 2011-06-24
> FMO10604.5prime
CAGTCGACATGTGGATCGTACTGTGCGCTTTTCTTGCCCTTCCACTGTTC
TTGGTGACCTATTTCGAGCTTGGACTACTGCGGCGAAAGCGAATGCTGAA
CAAATTCCAAGGCCCAAGTATGCTGCCTTTGGTGGGCAATGCTCATCAGA
TGGGAAACACTCCCACAGAGATTTTGAACCGGTTTTTTGGCTGGTGGCAT
GAGTACGGCAAGGATAACTTTCGTTATTGGATAGGTTACTACTCCAATAT
TATGGTCACTAATCCCAAATACATGGAGTTTATACTTAGCAGTCAAACTC
TGATATCCAAGTCCGATGTATATGATCTTACTCACCCATGGCTGGGATTG
GGCCTCCTCACCAGTACTGGCAGCAAATGGCACAAACACCGGAAGATGAT
AACCCCAGCCTTCCACTTCAACATCCTGCAGGACTTTCACGAGGTCATGA
ACGAGAACTCCACCAAGTTCATAGATCAGCTGAAGAAGGTGGCAGACGGA
GGCAACATCTTCGATTTCCAGGAAGAGGCACATTATTTGACTCTGGACGT
CATTTGCGATACAGCTATGGGTGTGTCCATCAATGCCATGGAAAACCGAA
GTTCCTCCGTTGTGCAAGCCTTTAAAGATATTACCTACACCATTAAGATG
AGAGCTTTCAGTCCGTGGAAGCGCAACAAATACCTCTTTCACTTTGCTCC
TGAATATCCAGAATATAGTAAAACACTGAAAACCCTGCAGACTTTACCAA
TGAGATAATAGCGAAGAGAATCGAAGTCCGAAAATCAGGCTTGAAGTCGG
CATTAAGCTGACGAGTTCTCCCGCAAGAAATGGCATTTTTGGACACTCTG
CTGTCATCCAAAGTGGATGGACGTCCTCTGACTTCCCAAGAGCTTTACGA
GGAAGTTTCCACCTTTTGTTTGAACGCATGACACTACTACATCTGGTGTA
GTTTGCAGTCTACTTACTTTCTCGACATCAGATGAACAGGAAAATTATTT
AACGAGCAGTGCGATGTGATGGGCCCCTTCTGGACTTGGTCGAAATGCCA
CGTTCAAGAAAAATCCCAAATGAAACATTTGGATTGTTTAAAAGGAGGCC
CACCGTCTTTTATCGATGTTCCCTTTCATTGTTGCCTTTTACCGTGAAAG
GACTACGTAT
FMO10604.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:43:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cyp4e1-RA | 1772 | CG2062-RA | 53..1213 | 9..1159 | 5115 | 97 | Plus |
Cyp4e2-RB | 1880 | CG2060-RB | 272..1271 | 123..1110 | 1410 | 77.3 | Plus |
Cyp4e2-RA | 1783 | CG2060-RA | 175..1174 | 123..1110 | 1410 | 77.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:43:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 8448101..8448452 | 277..628 | 1760 | 100 | Plus |
2R | 25286936 | 2R | 8448527..8448897 | 629..990 | 1425 | 97.3 | Plus |
2R | 25286936 | 2R | 8445532..8445883 | 277..628 | 950 | 84.7 | Plus |
2R | 25286936 | 2R | 8447503..8447662 | 9..168 | 800 | 100 | Plus |
2R | 25286936 | 2R | 8447930..8448042 | 166..278 | 565 | 100 | Plus |
2L | 23513712 | 2L | 9749185..9749442 | 593..336 | 480 | 79.1 | Minus |
2R | 25286936 | 2R | 8448964..8449106 | 991..1131 | 295 | 86.8 | Plus |
2R | 25286936 | 2R | 8446145..8446312 | 828..990 | 190 | 79.8 | Plus |
Blast to na_te.dros performed 2014-11-26 23:43:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
rover | 7318 | rover ROVER 7318bp | 4838..4952 | 705..818 | 112 | 61 | Plus |
FMO10604.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:42:48 Download gff for
FMO10604.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp4e1-RA | 27..1195 | 1..1160 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:00:48 Download gff for
FMO10604.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp4e1-RA | 45..1213 | 1..1160 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:50:18 Download gff for
FMO10604.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp4e1-RA | 45..1213 | 1..1160 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:50:18 Download gff for
FMO10604.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 8447495..8447662 | 1..168 | 98 | -> | Plus |
2R | 8447933..8448042 | 169..278 | 100 | -> | Plus |
2R | 8448103..8448452 | 279..628 | 100 | -> | Plus |
2R | 8448527..8448896 | 629..989 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:00:48 Download gff for
FMO10604.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 4335000..4335167 | 1..168 | 98 | -> | Plus |
arm_2R | 4335438..4335547 | 169..278 | 100 | -> | Plus |
arm_2R | 4335608..4335957 | 279..628 | 100 | -> | Plus |
arm_2R | 4336032..4336401 | 629..989 | 97 | -> | Plus |