FMO10616.5prime Sequence
356 bp (356 high quality bases) assembled on 2011-06-24
> FMO10616.5prime
CAGTCGACATGGGCGTCCAGGCAAATTTAGATGATTTGAGTGAGGAGGAG
AAAATCTTCTATATGTTTAAGGCCCATGACAATGATAATAACAATGCACT
GGACGGCCTCGAAATGATTCAGTCTGCCATGCATCATAACTATGACTATT
TCAAAAACAACGAGCGGGATGCATACCTACAAAATGCCACCGATGAGCTG
GAGCACTTTATAGAGGCAATTGATAAATTTCTGCTGATTGCCGACGACAA
TAACGATGGCCTGCTGCATTACCCGGAATTCGTGAAGGCAATTACCGGTG
GCAAGGAGCAGCCGAATGTGGACAGGAATATCCTGCGCGCAAGCTTTCTA
GACCAT
FMO10616.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:38:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12817-RB | 1060 | CG12817-RB | 250..582 | 6..338 | 1665 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:38:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 10224151..10224294 | 213..70 | 720 | 100 | Minus |
3R | 32079331 | 3R | 10223918..10224048 | 338..208 | 640 | 99.2 | Minus |
3R | 32079331 | 3R | 10224350..10224416 | 72..6 | 335 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:38:13 has no hits.
FMO10616.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:42:02 Download gff for
FMO10616.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12817-RB | 232..570 | 1..342 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:34:44 Download gff for
FMO10616.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12817-RB | 247..585 | 1..342 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:48:13 Download gff for
FMO10616.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12817-RB | 247..585 | 1..342 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:48:13 Download gff for
FMO10616.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 10223915..10224042 | 214..342 | 98 | <- | Minus |
3R | 10224151..10224292 | 72..213 | 100 | <- | Minus |
3R | 10224351..10224418 | 1..71 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:34:44 Download gff for
FMO10616.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 6049637..6049764 | 214..342 | 98 | <- | Minus |
arm_3R | 6049873..6050014 | 72..213 | 100 | <- | Minus |
arm_3R | 6050073..6050140 | 1..71 | 95 | | Minus |