Clone FMO10620 Report

Search the DGRC for FMO10620

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:106
Well:20
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG11666-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10620.5prime Sequence

314 bp (-88 high quality bases) assembled on 2011-06-24

> FMO10620.5prime
CAGTCGACATGGATGTCAAGCAACAGTTGCAGGCGCAGGATGTGGATAAG
GATCTCGACGAGGTAACCACGAGCAGCGAGGAGCAGTACAACCATGACCT
GACCAAAAACTCCAGTTTGACGACCGTGTGCAGCACTTTTCCATTGTCCT
CGAGGATCGAAAGCTACCATCACTGGCAGCCGATAGACATCGACATTGGG
CGAGAGGACATCTTGGAACGTAAATTGGAAATGGAGAGTGAGCGAATGGT
CCAGCCCGCCATGTCCATTCCACTCGCCCTAAATGCCATGCATCCTGCAA
GCTTTCTAGACCAT

FMO10620.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:38:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG11666-RA 561 CG11666-RA 36..323 9..296 1440 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:38:25
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 20984721..20985008 9..296 1440 100 Plus
Blast to na_te.dros performed on 2014-11-26 23:38:26 has no hits.

FMO10620.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:42:04 Download gff for FMO10620.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11666-RA 32..326 1..300 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:36:13 Download gff for FMO10620.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11666-RA 32..326 1..300 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:48:19 Download gff for FMO10620.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11666-RA 32..326 1..300 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:48:19 Download gff for FMO10620.5prime
Subject Subject Range Query Range Percent Splice Strand
X 20984717..20985011 1..300 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:36:13 Download gff for FMO10620.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 20855744..20856038 1..300 98   Plus