Clone FMO10622 Report

Search the DGRC for FMO10622

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:106
Well:22
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG14298-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10622.5prime Sequence

359 bp (359 high quality bases) assembled on 2011-06-24

> FMO10622.5prime
CAGTCGACATGAAATTGAAAATCAATCTGACGTTCCTCCGTGCGACACTC
GTCGGTCTCCTGTCCATCATCCTCCTGACACAGACCGCGCATATCGAGGC
CTTTGGAAGCGGAGGCAGCTCTTCTGGCAATGGGGCAGTGGTGTCGTGCA
AAGAGCTGAACAATTTCAACTGCTATGTGGGCCGCAACGAGGGTAACTTT
TGCAGCAGGAAGGATCAGACCAAGGTCGTTACACGCTGGTACTTCGACAA
GGGCGTCTGCAAGCCCTTCAACTATAAAGGATGCAACGGCAATCGCAATC
GCTTCTGCTCGCAGGAAAGCTGCGATGCACGCTGCGGCGATGCAAGCTTT
CTAGACCAT

FMO10622.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:43:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG14298-RB 875 CG14298-RB 256..590 7..341 1675 100 Plus
CG14298-RA 695 CG14298-RA 76..410 7..341 1675 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:43:53
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 18876738..18876919 160..341 910 100 Plus
3R 32079331 3R 18875783..18875935 7..159 765 100 Plus
Blast to na_te.dros performed 2014-11-26 23:43:55
Subject Length Description Subject Range Query Range Score Percent Strand
3S18 6126 3S18 DM23420 6126bp Derived from U23420 (g733531) (Rel. 48, Last updated, Version 3). 2585..2622 282..320 102 80 Plus

FMO10622.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:42:49 Download gff for FMO10622.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14298-RA 76..410 7..341 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:00:54 Download gff for FMO10622.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14298-RA 76..410 7..341 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:50:23 Download gff for FMO10622.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14298-RA 76..410 7..341 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:50:23 Download gff for FMO10622.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 18875783..18875935 7..159 100 -> Plus
3R 18876738..18876919 160..341 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:00:54 Download gff for FMO10622.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 14701505..14701657 7..159 100 -> Plus
arm_3R 14702460..14702641 160..341 100   Plus