FMO10626.5prime Sequence
808 bp (808 high quality bases) assembled on 2011-06-24
> FMO10626.5prime
CAGTCGACATGGAGCAGAAAGTGGCTGCCGAGCAGAACATCTTCGTCGTC
GACCGCAAATTGAAGAAAACTTGCCCGCAAGCAGATGTCGAGCGCCTGGC
TAAGACGCACTGGCTCACCGACTATGCCCGGGATATATTTTTGACCATGA
GGGAGCAAGAACTCAGCCGTCGGCCTTTGTTTTACCTTTCGCCGCAGCTG
AACGAGCGCCGAAGAATGCTGCAGTTGCTCAAACTGGCGACCAGCGCCCA
CAAGCTTAGTCGCTGTGCTTTGCACCTGGCCGTCTACTATATGGATCGCT
TTGTTGATTACTACAAAATCCGTCCGGACAAATTGCTCCTGGTGGCCATC
ACTTGTCTTCATATAGCTGCGCAGATCGAAAACACGGATGCGTTTATTCC
GCGCTACAGCGAAATGAACCGATTGGTCAAGAACGCCTATACGGCATTCG
AGTACAAGGCTGTGGAAAGGAAGATCCTGTGCTTCCTGAACTTCGAGCTA
ATACGTCCCACCACCGCCAGTTTTGTGGAGCTCTTCGCCTGCAGTTTTCT
CACTCGCTCCGATTTCAAGAACTACATCGAGATGTTGGATGAGTACGAGC
GGAACCATCACAGCCAGCCGTACCAGCGATATATAAGCTTCGAAGAGATG
CTGTCCATTTTGGCGCAGTTGCTCCTTCGCATGGCGGATTATACATTGTA
CAATTTGCCAACGATCTGCCATCCCTTTTGGCTGCCGCCTGCATTGCTGC
AGTTCGCCAGGTCAGCGGGGTCAGCGCTGGTCGGAGTACCGCAAGCTTTC
TAGACCAT
FMO10626.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:38:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CycJ-RB | 1471 | CG10308-RB | 112..894 | 9..790 | 3875 | 99.7 | Plus |
CycJ-RA | 1478 | CG10308-RA | 112..901 | 9..790 | 3795 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:38:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 3466949..3467372 | 279..702 | 2105 | 99.8 | Plus |
3L | 28110227 | 3L | 3466684..3466872 | 91..279 | 945 | 100 | Plus |
3L | 28110227 | 3L | 3466539..3466622 | 9..92 | 420 | 100 | Plus |
3L | 28110227 | 3L | 3467433..3467521 | 703..790 | 395 | 98.9 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:38:51 has no hits.
FMO10626.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:42:08 Download gff for
FMO10626.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CycJ-RB | 126..913 | 9..798 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:38:41 Download gff for
FMO10626.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CycJ-RB | 112..899 | 9..798 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:48:27 Download gff for
FMO10626.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CycJ-RB | 112..899 | 9..798 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:48:27 Download gff for
FMO10626.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 3466539..3466622 | 9..92 | 100 | -> | Plus |
3L | 3466686..3466872 | 93..279 | 100 | -> | Plus |
3L | 3466950..3467372 | 280..702 | 99 | -> | Plus |
3L | 3467433..3467526 | 703..798 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:38:41 Download gff for
FMO10626.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 3466686..3466872 | 93..279 | 100 | -> | Plus |
arm_3L | 3466539..3466622 | 9..92 | 100 | -> | Plus |
arm_3L | 3466950..3467372 | 280..702 | 99 | -> | Plus |
arm_3L | 3467433..3467526 | 703..798 | 94 | | Plus |