Clone FMO10627 Report

Search the DGRC for FMO10627

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:106
Well:27
Vector:pMK33-CFH-BD
Associated Gene/TranscriptsPLA2-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10627.5prime Sequence

340 bp (-65 high quality bases) assembled on 2011-06-24

> FMO10627.5prime
CCCTTTTAATATCCTCCACATGTGGCTGCTGCGCGAAGCGTTCTTTTTTG
GGCTACTGGCCATGGCTTGGGCCTTCGGCGACGAGGCTATCTTTGAGGAC
GAGGACATCTACAACCAGGCACTGCCACCAGTTCCCCATACGGGCATCAC
GGTGCCCGGAACCAAGTGGTGCGGACCGGGCAACACGGCGGCGAACTTCG
AGGATTTGGGCCGCGAACGGGAGACGGACAAGTGCTGTCGTGCCCACGAC
CATTGCGACGAGATTATCGAGTCCCACGGAGCACTCCACGGACTGCCCAC
CAACACAGACTGGTTTCCCATGGCAAGCTTTCTAGACCAT

FMO10627.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:38:56
Subject Length Description Subject Range Query Range Score Percent Strand
sPLA2-RB 725 CG11124-RB 30..334 18..322 1525 100 Plus
sPLA2-RC 897 CG11124-RC 209..512 18..321 1520 100 Plus
sPLA2-RA 718 CG11124-RA 30..333 18..321 1520 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:38:54
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7443072..7443376 18..322 1525 100 Plus
Blast to na_te.dros performed on 2014-11-26 23:38:55 has no hits.

FMO10627.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:42:08 Download gff for FMO10627.5prime
Subject Subject Range Query Range Percent Splice Strand
sPLA2-RB 28..341 18..333 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:39:12 Download gff for FMO10627.5prime
Subject Subject Range Query Range Percent Splice Strand
sPLA2-RB 30..343 18..333 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:48:29 Download gff for FMO10627.5prime
Subject Subject Range Query Range Percent Splice Strand
sPLA2-RB 30..343 18..333 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:48:29 Download gff for FMO10627.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 7443072..7443381 18..328 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:39:12 Download gff for FMO10627.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3330577..3330886 18..328 99   Plus