FMO10631.5prime Sequence
1159 bp (1054 high quality bases) assembled on 2011-06-24
> FMO10631.5prime
CAGTCGACATGGAACTTAAAAAAATGAAATCTTTAAAAGACGACGCTGCC
GAATCCCAATCTCAGCCAGAAACCGGGGTCCGGAAGCGCCGCAACCCCTT
TAACACACAGAGGCTGAAGGAAGAGAAGGAGCGCCGCCAGAAAAAGCGAG
CGCGTCTCATCGTGCGCAACATCAGTTACAAGTCCACGGAGGACTCGCTT
CGCGAGCATTTCGGGCAGTGGGGCACGCTGGAGGATGTACACATCCTGAA
ACGAGGTGACGGGAAGCTGGTGGGCTGCGCCTTTGTCCAGTACGAGACCA
TTAACCAGGCCACCAAAGCGATCCTGAACTCCAACGGCAAAGAGCTGCTC
GGGAGAAAGGTATTTGTGGACTGGGCTTTGGGCAAGGACGAGTATGTATC
AAAGAACCCGAAAGACGAGGAGCCGGATGAGAAGAAGCCAAAGGTGGAAG
TGAAAGAGGAAAACGGTGACGAGAAGGAAGTTAAGGAGGAAAGCGACGCG
GAAGTTGGCAAGGAAGATGAAAGTTCTGGGGAGGATTCTGATGCGGAATC
CGGCGAAGATGAAGAGGACTCTGGAGAATCTGAAGACGAAGAGAACGACG
AAGATCATAAGGAGAACAAGGACGAATTAAAATCAAAATTGGATATCAAA
AATGTCAAAAGGGAAAAGCAAATCTCCAACGACGTCCAGGAGGGCTGCAC
GGTCTTCATTAAAAACGTTCCCTTCGATGCAGAGGATGCCGACTTGAGAA
AGGCGTGCCGCAAATTCTGCTTGTCAGCTACGCCATTATTAATCGCCAGG
CGGTTTCTGGCCACTCCAAGGGTACAGCCTTCGTTAAATTCAAAGCCAAG
GAGTCAGCGGATCTTTGTCTGCAAGCTGGAACAGAGTTTAAGTTGATGGA
CGAGTCCTGCATCCTCATCCCGCATTGAGCCGCGAGGAAATGAAGTCGAA
GCAGTCGCAGAAACAAAAAGACGATGCCAGACTCACGAAACCTGTATTTG
CAAGGAAGTCTAATCATGCTGGAGCGAAGCAGCCGATGGGGTTTCTGCCT
CAGACATGGCAGGCGACAATGTCCTTGAGCAAGTTAGAACGCCAGGTGCT
CCAGAAACTGATCGGTTGTTCCCGGGAATCCGCTGGCCATCCAATCTCCT
ACCTATTGC
FMO10631.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:39:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4806-RA | 2070 | CG4806-RA | 43..1177 | 9..1130 | 5080 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:39:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24667238..24668301 | 1060..9 | 4785 | 98.4 | Minus |
Blast to na_te.dros performed 2014-11-26 23:39:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| HeT-A | 6083 | HeT-A DM06920 6083bp Derived from U06920.2 (Rel. 67, Last updated, Version 14). | 599..667 | 427..494 | 153 | 71 | Plus |
FMO10631.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:42:10 Download gff for
FMO10631.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4806-RA | 21..1114 | 1..1081 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:40:12 Download gff for
FMO10631.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4806-RA | 34..1127 | 1..1081 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:48:33 Download gff for
FMO10631.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4806-RA | 34..1127 | 1..1081 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:48:33 Download gff for
FMO10631.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24667238..24668308 | 1..1060 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:40:12 Download gff for
FMO10631.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20554761..20555831 | 1..1060 | 98 | | Minus |
