FMO10632.5prime Sequence
1174 bp (1041 high quality bases) assembled on 2011-06-24
> FMO10632.5prime
CAGTCGACATGGAGCTAAACAATCTAATACGTATGTGTTTCCAAATCGAA
CTGGCCCATTGGTTCTATTTGGATTTCTTTTGTGCCCCCGAATCTGGCGA
GGATGGCGAGACCCCGAAGTGCGTGCAACGAAAGCTGCCATCGGTGGGCA
TCAAGCAGTTTGCCATGCAGTTGTTCCAACACATTCCCTTCCTGAACAAA
CATTTTGGCACCGTGGATCAAATCCTGGACGAGTGGAAGAACTACAAGCT
ATCGGTGCCCACTTATGGCGCTATTCTGGTGTCCGAGGATCACAATCACT
GCTTGCTAGTGCAGTCCTACTTCGCGCGCAACTCCTGGGGATTTCCCAAG
GGCAAGATCAATGAGAACGAAGACCCAGCCCATTGTGCAACGAGAGAGGT
TTATGAGGAGACCGGGTTCGATATCACGGACCTAATCGATGCCAACGACT
ACATCGAGGCGTTCATCAACTACCAGTACACGCGGCTGTACGTGGTGCGA
AACATACCGATGGACACGCAGTTCGCGCCCCGCACTCGCAACGAGATCAA
GTGCTGCGACTGGTTCCGTATCGATGCGCTGCCGGTGAACAAGAACGATG
CCATATCAAAGGCCAAGTTGGGCAAGACCTCCAACTCCTTCTTCATGATT
ATGCCGTTTGTGAAGCGCCTGAAGAAGTGGGTGAACGATCGGAAGGCTGG
AATCGAGCCGCGTCGCCGCAAATTCTCTGGTCAGCAATCGCCAAAAGCGG
CCTCGCCCACCAATATGAACGGAAATTGCAAGAAGGACGTCACAGGAGTG
CGAAATGAATCGCAACGACAGAGGCACAAGTCCATGGGCGACTTGGATGG
CGTCAAATTGATAATCTCAATGGCAAGGGGACCGTTGGAACGGGAGCGGG
ATCGGCAGCTTCCGCCTCGCCACGCTGCCATCAACTCGATGAACATATGC
ATAGCATGGGAAACGCATTAGCAAATGCGCTGCGGGCAGCATCAGCACGC
CACTACAATAGCACGCAATGACGTCAATGCGCGTCGTAGAGGTACTTATC
CTCGAGCGTAACTGTTCATAGCAAGTCGAACGATGGCGCCGCCAATCGCA
GCCATGAAAGAATTGTCAGCTCTTTCGATTTAATGCAAGGGAAGCCGCAC
ACACTTAGGCACGCTTAAGGCCCA
FMO10632.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:39:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| DCP2-RD | 2690 | CG6169-RD | 548..1719 | 6..1149 | 4970 | 96.7 | Plus |
| DCP2-RA | 3665 | CG6169-RA | 1523..2694 | 6..1149 | 4970 | 96.7 | Plus |
| DCP2-RB | 2850 | CG6169-RB | 708..1879 | 6..1149 | 4970 | 96.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:39:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15822253..15822810 | 951..397 | 2640 | 99.5 | Minus |
| 3L | 28110227 | 3L | 15822962..15823185 | 399..176 | 1105 | 99.6 | Minus |
| 3L | 28110227 | 3L | 15823247..15823420 | 179..6 | 870 | 100 | Minus |
Blast to na_te.dros performed 2014-11-26 23:39:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TAHRE | 10463 | TAHRE OSV 10463bp | 1110..1201 | 715..807 | 110 | 63.2 | Plus |
FMO10632.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:42:10 Download gff for
FMO10632.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dcp2-RA | 1517..2608 | 1..1072 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:40:42 Download gff for
FMO10632.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dcp2-RB | 705..1796 | 1..1072 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:48:35 Download gff for
FMO10632.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| DCP2-RB | 705..1796 | 1..1072 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:48:35 Download gff for
FMO10632.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15823247..15823422 | 1..179 | 98 | | Minus |
| 3L | 15822166..15822808 | 399..1027 | 97 | <- | Minus |
| 3L | 15822963..15823181 | 180..398 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:40:42 Download gff for
FMO10632.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15815266..15815908 | 399..1027 | 97 | <- | Minus |
| arm_3L | 15816063..15816281 | 180..398 | 100 | <- | Minus |
| arm_3L | 15816347..15816522 | 1..179 | 98 | | Minus |
