FMO10635.5prime Sequence
1108 bp (985 high quality bases) assembled on 2011-06-24
> FMO10635.5prime
CAGTCGACATGCCATCGGCAGATCAGATCCTGTTTGTAAATGTCACCACA
ACGGTGGCGGCGGCGGCTCTAACCGCTGCGGCCGCCGTCAGCACCACAAA
GTCCGGAAGCGGCAACGCCGCACGGGGCTACACGGATTCGGATGACGATG
CGGGCATGGGAACGGAGGCGGTGGCTAACATATCCGGCTCGCTGGTGGAG
GGCCTGACCACCGTTACCGCGGCATTGAGTACGGCTCAGGCGGACAAGGA
CTCAGCGGGAGAATGCGAAGGAGCTGTGGAGGAGCTGCATGCCAGCATCC
TGGGCCTCCAGCTGGCTGTGCCGGAGTGGGAGGCCCTTCTCACCGCCCTG
GTTCTCTCGGTCATTATCGTGCTGACCATCATCGGGAACATCCTGGTGAT
TCTGAGTGTGTTCACCTACAAGCCGCTGCGCATCGTCCAGAACTTCTTCA
TAGTTTCGCTGGCGGTGGCCGATCTCACGGTGGCCCTTCTGGTGCTGCCC
TTCAACGTGGCTTACTCGATCCTGGGGCGCTGGGAGTTCGGCATCCACCT
GTGCAAGCTGTGGCTCACCTGCGACGTGCTGTGCTGCACTAGCTCCATCC
TGAACCTGTGTGCCATAGCCCTCGACCGGTACTGGGCCATTACGGACCCC
ATCAACTATGCCCAGAAGAGGACCGTTGGTCGCGTCCTGCTCCTCATCTC
CGGGGTGTGGCTACTTTCGCTGCTGATAAGTAGTCCGCCGTTGATCGGCT
GGAACGACTGGCCGGACGAGTTCACAAGCGCCACGCCCTGCGAGCTGACC
TCGCAGCGAGGCTACGTGATCTACTCCTCGCTGGGCTCCTTCTTTATTCC
GCTGGCCATCATGACGATCGTCTACATCGAGATCTTCGTGGCCACGCGGC
GCCGCCTAAGGAGCGAGCCAGGCCACAAGCTTACACGATCGCTCTGAAGT
CCACTGAGCTCGAGCCGATGGCAACTCCTCGCCGTCGCGCCTCCTACTCA
GGCTCAAGTCGCGTCTCCTAGCCAGCTGGCTTGCTGCGGCGGATCGGGCC
AGTTCGCCAGCTATGATCCGACGACAGAAGGCATCGCAGTGACCCACAGC
GCAGATTT
FMO10635.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:38:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Oct-TyrR-RB | 3675 | CG7485-RB | 665..1739 | 9..1069 | 5005 | 98.5 | Plus |
Oct-TyrR-RA | 3682 | CG7485-RA | 672..1746 | 9..1069 | 5005 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:38:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 22061962..22062671 | 331..1032 | 3140 | 98.5 | Plus |
3L | 28110227 | 3L | 22061081..22061405 | 9..333 | 1625 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:38:35 has no hits.
FMO10635.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:42:06 Download gff for
FMO10635.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
TyrR-RB | 665..1747 | 9..1075 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:37:12 Download gff for
FMO10635.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Oct-TyrR-RA | 672..1754 | 9..1075 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:48:22 Download gff for
FMO10635.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Oct-TyrR-RA | 672..1754 | 9..1075 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:48:22 Download gff for
FMO10635.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 22061081..22061404 | 9..332 | 100 | -> | Plus |
3L | 22061964..22062722 | 333..1075 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:37:12 Download gff for
FMO10635.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 22054181..22054504 | 9..332 | 100 | -> | Plus |
arm_3L | 22055064..22055822 | 333..1075 | 97 | | Plus |