Clone FMO10635 Report

Search the DGRC for FMO10635

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:106
Well:35
Vector:pMK33-CFH-BD
Associated Gene/TranscriptTyrR-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10635.5prime Sequence

1108 bp (985 high quality bases) assembled on 2011-06-24

> FMO10635.5prime
CAGTCGACATGCCATCGGCAGATCAGATCCTGTTTGTAAATGTCACCACA
ACGGTGGCGGCGGCGGCTCTAACCGCTGCGGCCGCCGTCAGCACCACAAA
GTCCGGAAGCGGCAACGCCGCACGGGGCTACACGGATTCGGATGACGATG
CGGGCATGGGAACGGAGGCGGTGGCTAACATATCCGGCTCGCTGGTGGAG
GGCCTGACCACCGTTACCGCGGCATTGAGTACGGCTCAGGCGGACAAGGA
CTCAGCGGGAGAATGCGAAGGAGCTGTGGAGGAGCTGCATGCCAGCATCC
TGGGCCTCCAGCTGGCTGTGCCGGAGTGGGAGGCCCTTCTCACCGCCCTG
GTTCTCTCGGTCATTATCGTGCTGACCATCATCGGGAACATCCTGGTGAT
TCTGAGTGTGTTCACCTACAAGCCGCTGCGCATCGTCCAGAACTTCTTCA
TAGTTTCGCTGGCGGTGGCCGATCTCACGGTGGCCCTTCTGGTGCTGCCC
TTCAACGTGGCTTACTCGATCCTGGGGCGCTGGGAGTTCGGCATCCACCT
GTGCAAGCTGTGGCTCACCTGCGACGTGCTGTGCTGCACTAGCTCCATCC
TGAACCTGTGTGCCATAGCCCTCGACCGGTACTGGGCCATTACGGACCCC
ATCAACTATGCCCAGAAGAGGACCGTTGGTCGCGTCCTGCTCCTCATCTC
CGGGGTGTGGCTACTTTCGCTGCTGATAAGTAGTCCGCCGTTGATCGGCT
GGAACGACTGGCCGGACGAGTTCACAAGCGCCACGCCCTGCGAGCTGACC
TCGCAGCGAGGCTACGTGATCTACTCCTCGCTGGGCTCCTTCTTTATTCC
GCTGGCCATCATGACGATCGTCTACATCGAGATCTTCGTGGCCACGCGGC
GCCGCCTAAGGAGCGAGCCAGGCCACAAGCTTACACGATCGCTCTGAAGT
CCACTGAGCTCGAGCCGATGGCAACTCCTCGCCGTCGCGCCTCCTACTCA
GGCTCAAGTCGCGTCTCCTAGCCAGCTGGCTTGCTGCGGCGGATCGGGCC
AGTTCGCCAGCTATGATCCGACGACAGAAGGCATCGCAGTGACCCACAGC
GCAGATTT

FMO10635.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:38:37
Subject Length Description Subject Range Query Range Score Percent Strand
Oct-TyrR-RB 3675 CG7485-RB 665..1739 9..1069 5005 98.5 Plus
Oct-TyrR-RA 3682 CG7485-RA 672..1746 9..1069 5005 98.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:38:34
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 22061962..22062671 331..1032 3140 98.5 Plus
3L 28110227 3L 22061081..22061405 9..333 1625 100 Plus
Blast to na_te.dros performed on 2014-11-26 23:38:35 has no hits.

FMO10635.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:42:06 Download gff for FMO10635.5prime
Subject Subject Range Query Range Percent Splice Strand
TyrR-RB 665..1747 9..1075 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:37:12 Download gff for FMO10635.5prime
Subject Subject Range Query Range Percent Splice Strand
Oct-TyrR-RA 672..1754 9..1075 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:48:22 Download gff for FMO10635.5prime
Subject Subject Range Query Range Percent Splice Strand
Oct-TyrR-RA 672..1754 9..1075 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:48:22 Download gff for FMO10635.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 22061081..22061404 9..332 100 -> Plus
3L 22061964..22062722 333..1075 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:37:12 Download gff for FMO10635.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 22054181..22054504 9..332 100 -> Plus
arm_3L 22055064..22055822 333..1075 97   Plus