Clone FMO10639 Report

Search the DGRC for FMO10639

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:106
Well:39
Vector:pMK33-CFH-BD
Associated Gene/Transcriptl(2)03709-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10639.5prime Sequence

920 bp (920 high quality bases) assembled on 2011-06-24

> FMO10639.5prime
CAGTCGACATGGCACAGAGCAAATTGAACGATCTTGCCGGCAAGCTGGGC
AAAGGTGGTCCGCCGGGATTGGGAATCGGACTGAAGGTCCTGGCCGCCGT
GGGAGCAGCCGCCTATGGAGTCAGTCAGTCCCTGTACACCGTTGAGGGTG
GTCACCGCGCCATCATCTTCAGCCGTCTGGGCGGCATCCAGAGCGACATT
TACTCCGAGGGACTGCACGTGCGCATCCCCTGGTTCCAGTATCCCATTAT
CTATGACATTCGCTCGCGTCCCCGCAAAATATCCTCGCCCACTGGCTCCA
AGGATCTGCAGATGATCAACATCTCGCTGCGTGTGCTGTCGCGCCCCGAT
TCCCTGAACCTGCCCTATCTGCACAAGCAGCTGGGCGTGGACTACGACGA
GAAGGTGCTGCCCTCCATTTGCAACGAGGTGCTGAAGAGCGTGATTGCCA
AGTTCAATGCCTCGCAGCTTATTACCCAGCGTCAGCAGGTATCCCTACTC
ATCCGCAAGGAGCTGGTCGAGCGCGCCCGCGACTTCAACATCATTCTGGA
CGATGTGTCCCTCACCGAGCTGAGCTTCGGCAAGGAATACACGGCGGCCA
TTGAGGCCAAACAAGTGGCTCAGCAGGAGGCACAGCGGGCTGTCTTCTTT
GTGGAGCGCGCCAAGCAGGAGAAGCAGCAGAAGATTGTTCAGGCTGAGGG
AGAAGCCGAGGCTGCTAAAATGTTAGGTCTGGCCGTGAAGCAGACCCAGC
CTACCTGAAGCTGCGCAAGCTGCGTGCCGCTCAAAGCATTGCACGCACGA
TTGCCAGCTCACAGAACAAGGTCTATTTGTCGGCGGATAGCTTGATGCTT
AACATCCAGGACTCTGGCTTCGATGACATGACCGAGAAGTTTACAAAGTA
AAGCAAGCTTTCTAGACCAT

FMO10639.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:39:48
Subject Length Description Subject Range Query Range Score Percent Strand
Phb2-RF 1614 CG15081-RF 167..1063 9..902 4410 99.7 Plus
Phb2-RA 1554 CG15081-RA 167..1063 9..902 4410 99.7 Plus
Phb2-RB 1518 CG15081-RB 71..967 9..902 4410 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:39:45
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 18820195..18820545 141..491 1755 100 Plus
2R 25286936 2R 18820603..18820838 487..722 1180 100 Plus
2R 25286936 2R 18819633..18819765 9..141 665 100 Plus
2R 25286936 2R 18821183..18821273 799..889 455 100 Plus
2R 25286936 2R 18821041..18821118 723..799 340 98.7 Plus
Blast to na_te.dros performed on 2014-11-26 23:39:47 has no hits.

FMO10639.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:42:15 Download gff for FMO10639.5prime
Subject Subject Range Query Range Percent Splice Strand
l(2)03709-RA 130..1039 1..909 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:44:10 Download gff for FMO10639.5prime
Subject Subject Range Query Range Percent Splice Strand
l(2)03709-RB 63..972 1..909 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:48:48 Download gff for FMO10639.5prime
Subject Subject Range Query Range Percent Splice Strand
Phb2-RB 63..972 1..909 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:48:48 Download gff for FMO10639.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 18821045..18821118 727..799 98 -> Plus
2R 18821184..18821293 800..909 95   Plus
2R 18819625..18819765 1..141 97 -> Plus
2R 18820196..18820542 142..488 100 -> Plus
2R 18820605..18820843 489..726 98 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:44:10 Download gff for FMO10639.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 14708550..14708623 727..799 98 -> Plus
arm_2R 14708689..14708798 800..909 95   Plus
arm_2R 14707130..14707270 1..141 97 -> Plus
arm_2R 14707701..14708047 142..488 100 -> Plus
arm_2R 14708110..14708348 489..726 98 -> Plus