FMO10643.5prime Sequence
1157 bp (1035 high quality bases) assembled on 2011-06-24
> FMO10643.5prime
CAGTCGACATGCAGGCCCATCATGCGATGCCCGATTTCCGATGCCGGAAT
AATTGCCAGCACAAGGAGTGCCAGAGGCATGCTCCTTTGGGCATAATCGA
TCAGCACACCCAGTGCAAGTGCTTGGGCGAGGTAAATGCCTCATCGATTT
TCCTAGAAAATGTCCTGGACCTGGCCAACACTTTGGCCCAGGTGATGATC
ATCTGTGGACTGCACGAGTGCAAAGCGAAATCAACCGTGGACATTATCAC
ATATGCCTTCTTGCATTACGATCAGGTGTGCTATTGCATTGATACCACGC
CCAAGAAGCGACTGAGAAAGGAGGATTTGTTCCACGAGCTGGGCAAGAAG
TCGCTGATGAACAAGGTGGAGGCCCACTTGGCCTATGCCATCATCAAGAG
GGGATTCAAGGCCTTCTACTACGAGCCGAAAGTGGACTTGACCTACGATG
AGCAAGGCAGACCCTCGTACAACGATGAATGCGTCTGGGTCCACGCAGCC
AGGAAGTCAGCCGAGTCCTATGCCCGCTTCGATGGCCTCTCCTGCGCCGA
ACAGTTGGCATACGAGGCCAAGATCAAAATAGCCTTCAAGAAGTTCTACG
ATCGCATGCAGACGCGCAAGAGGCAGCCGGAGGGCGACGATTGCAACTGC
TGCTTCTGTGCCAAGAAGCGGGGACATCTGGTCTATGCCAAGGAACCGAC
TCCCTGCACTTCCAACAAAAAGAAAGCCCAAGCACGTGTGTCCATATTGC
TGCAAGAAGAAGCAGAAGCAGCAGTACACACACCCTGCTCGCCAGCCGGC
CAAGTGCCCCAAGTGCCACAAGTCGCGCAAGTTCTGCTGCTGCACAAAAT
GGACTTCAACTTGCAGTGGGTCAAGAGCATATGGGAGCGGCCGGACTTCA
ATCAGTACTACAAGAACGAGATCGCCGAAATCGAGGACCGCTGGTCAAGG
AACCTGCTGGCTGCCGCCGGAGCCTGAGAGAGCTGCTCGATGAGGGCGAG
GGCGAGGAGAGAGAGCCCACCAGGAAATGTCGCCGGAGCTTCTCCTCGCC
CTCGCGGCAACCGGTGCCCACATATAACTGATGAGGCAAACCGTTCCTCC
ACTGCCACAAACAAGCCGTCGAATCACCCGGAGGGTGAAGGGCGAAGACC
CAGGCTT
FMO10643.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:40:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3517-RA | 1421 | CG3517-RA | 143..1284 | 9..1145 | 5125 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:39:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 19424004..19425057 | 1054..9 | 4825 | 98.5 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:40:00 has no hits.
FMO10643.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:42:17 Download gff for
FMO10643.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3517-RA | 134..1219 | 1..1076 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:45:39 Download gff for
FMO10643.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3517-RA | 134..1219 | 1..1076 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:48:54 Download gff for
FMO10643.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3517-RA | 134..1219 | 1..1076 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:48:54 Download gff for
FMO10643.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 19423993..19425061 | 1..1063 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:45:39 Download gff for
FMO10643.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 15249715..15250783 | 1..1063 | 98 | | Minus |
