FMO10645.5prime Sequence
1073 bp (975 high quality bases) assembled on 2011-06-24
> FMO10645.5prime
CAGTCGACATGGGTGGCGGAGATCTAAATCTGAAGAAATCATGGCATCCG
CACACGATGAAAAACCAGGAGCGCGTTTGGAAGGCGGAGGAGCAAGCGAA
GATGGAGGAGCGCAAGCTGCAGGATCTGCGCAAGGAGATCAACGAGGAGC
GGGACAGAGAGGAACTAAGGCGATTGGGCGAAAGTTCCGGAGTGCTGAGC
AATAATGGCGGAGCCGCCGGCGAGGCCAAGCTGGAGTGGATGTACAAAAA
CAGCACAGAGCTGATCAACCGCGAGGAGTACCTCCTGGGCCGTAAGATCG
ACAAGTCCTTTGAGACGCTGCAAGCGGAGGAAAGCCGCCAGGAGCAGAAC
ACAGTGGGTCTCAAGCAAACGATCAACCATGTGGAGCACGACTGTGTGCC
CTTCTCCATCCGGACCTACCGCAATGTGCAGTCCAACGAACAGGTGGACA
TACAGCGCAAGACCCTCGAGGATCCCCTGATGCTCATCAAGCAGCGCGAA
ATGGAATCCCGTCGAAAGCTGCTTGAGAACCCCGTCAAGCTGAAGGAAAT
CCATCGCATTCTCAAGACTGAACAGGAACAAAAGGCCGCAGAGGGAAAGA
AGAAGAACAAGAAGAACAAAAAGTCTAAGAAATCCAAAAAGAAGAAGAAG
AACCGACGATCCAGCAATGAGGAAAGTAGTGACAGCGAGAGCAATGATAG
CGACGATGACTTGGACAGAAAATTAGCCCGCCAAGTGAGCAAACTCAAGG
GAGACCAATGTGACCTTAAACTGGACAAGCTGCTGGACGCCAAGTACCGC
ACCATTTCAAATCAATTAGACATGGCCACCAAGAAGAAAAGAGCAAGAAT
CCAAGAGAGAAAAGCAGCGATAGCAGTGACGAAAGTAGTGACGAGAGGAG
AGCCAAGGAGAAGCACAAACGAGCCACAGCTCAGAGGACAGAAATCAGCG
AGAAGACGCAGAGTAGAGCCCCCGGGATAGAAAAAAGCGACGAGTAGAGT
CCGACAAGCAAGCAAAGAGTCAGATGAGAGAGTAAGGCGCAGACAGACGA
GTCCTAGCGAAAGACGGATAGAC
FMO10645.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:40:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cwc25-RA | 1730 | CG2843-RA | 102..1109 | 9..1003 | 4685 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:40:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2745557..2746309 | 250..991 | 3205 | 98.1 | Plus |
| 2L | 23513712 | 2L | 2745272..2745494 | 27..249 | 1115 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:40:11 has no hits.
FMO10645.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:42:18 Download gff for
FMO10645.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cwc25-RA | 98..1111 | 9..1011 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:46:39 Download gff for
FMO10645.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cwc25-RA | 102..1115 | 9..1011 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:48:58 Download gff for
FMO10645.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cwc25-RA | 102..1115 | 9..1011 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:48:58 Download gff for
FMO10645.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2745199..2745216 | 9..26 | 100 | -> | Plus |
| 2L | 2745272..2745494 | 27..249 | 100 | -> | Plus |
| 2L | 2745557..2746318 | 250..998 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:46:39 Download gff for
FMO10645.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2745199..2745216 | 9..26 | 100 | -> | Plus |
| arm_2L | 2745272..2745494 | 27..249 | 100 | -> | Plus |
| arm_2L | 2745557..2746318 | 250..998 | 98 | -> | Plus |
