FMO10650.5prime Sequence
1104 bp (959 high quality bases) assembled on 2011-06-24
> FMO10650.5prime
CCGTCGACATGCCTGACCACACGAGAGTTACCGCAACGACAAGGAGTAGG
CCATGGCTATGTGGAGCCATCCCAGTGCTGCTGCTCCTCCTGCTGACTCT
CGTAATCCTGCCTCCGGAAACCACCGCCTTCTGCCCCTCGAAGTGCCAGT
GTTTGGGCGGCGAGGCAAATAGTAGAGCGTTGTGCGTGGACGCCGCTCTG
GAGGATGTGCCTATCCAACTTAATCCGGAAACGAAATACATTAACCTTAC
AGTAAATCGGATTCGTACGCTAGAATTCTCGCTGCCATTCTACATGAAGC
TTGAGATCCTGGATCTCTCGCAGAATATCATCGAAACGCTGGGCTCGAAA
AACTTCGAGTACCAATCGGAACTGAGAACCCTGAATCTGAGCCGGAATTT
GGTCAGTTCCCTGCACAAACATGCCTTCAAGGGTCTGACCAATCTGTTGC
TTCTTGATCTCAGTTTCAATCGCATTGAGACAGTGCATCCCACCGCTCTA
AGTGATCTCGCCTCCCTGGTGGAGCTGGATCTTACGAATAACAATATTGT
CAGCTTGGAGGACATCTGCTTCAAGGGCATGAACACCCCTAGAGGTTCTC
GTGTTCCGGAATAATCGATTGCTAGACGTTCCAGCCAGTAATCTTTGGCA
TTTGCATGCCCTCAAGAGCCTGATATGTCCTTGAATCTGGTCGAGTTTGT
GCGGAATGACAGTTTCGAGGGCTTAAAGGAGCTTTTGGCCCTCAGCGTGC
AGGCAATGTGATGAGCGAACTGGATTTGAGTGCCTTCGAGGGACTTATAT
CCTTGAAACATCTGGATCTGTCCGATAATAATCTCACGATGGTGCCTACA
CAGCAGCTCTCGAAACTCTCGAACCTCACCTATTTGAACTGGGCGGCAAT
CGCTTTTCCCAGCTGCCTGCGTCGCCTTCTGACCTGTTTCATTGCGCGAA
TTGCATTTGAGCCGGCTGGACTTCTTGCACGCATCGATCAGAGCTTTGTG
GACAACACCGCACTACAACGCCTCCACTGACACATCCCCAGCTGACGAAC
TTACCGATGCCCTGTTCAAGAACTCAACATTCTTGGAGGTCTAATGCCAG
ACAC
FMO10650.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:40:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fili-RD | 4584 | CG34368-RD | 585..1687 | 9..1093 | 4800 | 97.1 | Plus |
| Fili-RC | 4859 | CG34368-RC | 860..1962 | 9..1093 | 4800 | 97.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:40:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21929520..21930350 | 9..838 | 3995 | 99.5 | Plus |
| 2R | 25286936 | 2R | 21934431..21934577 | 838..979 | 490 | 95.2 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:40:15 has no hits.
FMO10650.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:42:18 Download gff for
FMO10650.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fili-RC | 858..1934 | 9..1070 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:47:09 Download gff for
FMO10650.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fili-RC | 860..1936 | 9..1070 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:49:01 Download gff for
FMO10650.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fili-RC | 860..1936 | 9..1070 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:49:01 Download gff for
FMO10650.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21934432..21934592 | 839..991 | 95 | -> | Plus |
| 2R | 21929520..21930350 | 9..838 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:47:09 Download gff for
FMO10650.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17821937..17822097 | 839..991 | 95 | -> | Plus |
| arm_2R | 17817025..17817855 | 9..838 | 99 | -> | Plus |
