FMO10651.5prime Sequence
1104 bp (980 high quality bases) assembled on 2011-06-24
> FMO10651.5prime
CAGTCGACATGCATCTGCCAGCGGGTCCAACGATGGTGGCCAACAACACA
CAGGTCCTGGCCGCTGCCGCCGCCGCAGCAGCCGCCGCAGCGGCCGCGGT
AGCCCAGGGTCCTGGGCCGCAGCAGAGTAGCAATGCCACCACCGCCTCCG
CAATCGCCATCAATCCCGCCCAGAGTCTGGCCAACACGAGCACCCACTCG
GCCAGCAGCACGGGCAGCTCCACACCAGATCTCAGCACGAACAACACCAG
CTCGAGCAGCAACGCCACCACCAGTCCGCAGAACTCCGCCAAGATGCCCA
GCTCGATGACCGACATGTTCGCCAGCCTGCACGAGATGCTGCAGGAGTAT
CACGGCGAGCTGGCCCAGACCGGATCGCCCTCGATCCTCTGCAGCGCCCT
GCCCAATCACTGGCGGTCGAACAAGTCGCTGCCCGGAGCCTTCAAGGTGA
TCGCCCTGGACGACGTGCCCGATGGCACCCTGGTGTCCATCAAGTGCGGC
AACGACGAAAACTACTGCGGCGAGCTGAGGAACTGCACCACGACCATGAA
GAACCAGGTGGCCAAGTTCAACGATCTGCGCTTCGTGGGACGATCGGGAC
GCGGCAAGTCCTTCACGCTGACCATCACCATTGCCACCTATCCGGTGCAG
ATCGCCAGCTACAGCAAAGCCATCAAGGTGACCGTCGACGGGCCACGGGA
GCCAAGAAGTAAGCAAAGCTATGGCTATCCCCATCCCGGCGCGTTTAACC
CGTTCATGCTGAATCCCGCTTTGCTGGATGCGGCGTACATGACCTACGGC
TATGCGGACTACTTCCGCCACCAGGCAGCCGCCCAGGCGGCCAAGTGCAT
CATCCGGCACTGGCCAAGTCCTCGGCTTCTCGGTGTCGCCAAATCCCAAT
CATCGGTGGCCACAGCTCTCGTCGGCGGTTCAGCCATCTGAGTATCCCAT
CCGGCGCAGCATGGCAGCGCGGCGGACAACGCCGCATGATGCATCGCCAC
GGGAGCGGCGCCTGCACGCCCTATGCATCGCAGTTCCATTCAACATTGTG
CCGCGAGCCGCGCAGCAGCAGCTACAGGCCTCATCGGTTACTTGCCGGGT
ACTT
FMO10651.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:40:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
run-RC | 3145 | CG1849-RC | 922..1981 | 5..1044 | 4760 | 97.7 | Plus |
run-RA | 2474 | CG1849-RA | 251..1310 | 5..1044 | 4760 | 97.7 | Plus |
run-RB | 2171 | CG1849-RB | 251..1301 | 5..1044 | 4615 | 96.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:40:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 20694689..20695402 | 5..718 | 3555 | 99.9 | Plus |
X | 23542271 | X | 20695811..20696046 | 718..948 | 900 | 97 | Plus |
X | 23542271 | X | 9288353..9288560 | 385..592 | 290 | 76 | Plus |
X | 23542271 | X | 20541938..20542030 | 497..589 | 210 | 81.7 | Plus |
X | 23542271 | X | 20604130..20604203 | 571..498 | 190 | 83.8 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:40:20 has no hits.
FMO10651.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:42:19 Download gff for
FMO10651.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
run-RA | 243..1314 | 1..1050 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:47:39 Download gff for
FMO10651.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
run-RA | 243..1314 | 1..1050 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:49:03 Download gff for
FMO10651.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
run-RA | 245..1316 | 1..1050 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:49:03 Download gff for
FMO10651.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 20694683..20695401 | 1..717 | 99 | -> | Plus |
X | 20695811..20696123 | 718..1015 | 94 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:47:39 Download gff for
FMO10651.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 20565710..20566428 | 1..717 | 99 | -> | Plus |
arm_X | 20566838..20567150 | 718..1015 | 94 | == | Plus |