Clone FMO10652 Report

Search the DGRC for FMO10652

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:106
Well:52
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG10462-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10652.5prime Sequence

1189 bp (1055 high quality bases) assembled on 2011-06-24

> FMO10652.5prime
CAGTCGACATGGAGGACATCAAGATCAAGATGGAGCCGCAGGACGAAGTG
ACGGACAGTTCAATCAGAATTCTGAGCGCATGTGATACGCTGAAAATTTT
GGACGAGGGATCTCAAATGATAACAGTGCCGATCAGGGATCGTTTGCGTT
CCGAGGACGAGCGCCTATTTATCGCCAGCCTGGAACTCGGCCACCAACAG
ATATTTGCGTCTGAATCGGAGGACAACCCAAATCCAAAACATTGCGATAT
TTGCCAGTACAAGTTTAAAAGCCAACAGGATATATCAAGTCACCGGGTTC
ATCACGAAATGAACCTACATTTTTGTCGCCTGGGCTGTGGTATCTGGCTG
GACACGCTTGAAAAGATCCTTGAGCATGAATATCGCCAGCATTTCCAGCC
AGGGCGTGTGTTGTGCTGTAGGGTTTGCGATTTTATGGCCAATAGCGCGG
ACGATCTGGCCAGCCATATGCAAAAGCACATTTACGTATATCGCTTTGTT
TGCTCCATTTGTCGTCGGCATTTTGAGTCCAAACAGAGCCTCAATCTGCA
TAGGAAGCAGAGCCAGGACTTTTGCAGCCTGCTGGATTTCAGAAAGGGGT
CATCATCAAAGCCGGAACTTGTGGCAGTTAGTACGCCGGTACCTGAAGAG
TCGAATTGCTATGTGCAAATAAAAGAAGAGCCACTTAACGCAGAGGAAGC
AGACCGAATGCTATTGGAAGACAACCCTCCACTCAATGTAAAATTGGAAC
CACAGGACGAGGAAATGCCAGATGTGAGTAGGATTAAAGAGGAACAGTCA
AATGGTAGCGTCTGGACAGCCATACATACTCCGTTGAGGAATAAACTGCG
CCTGCCTGCTCTGGCCACTACCAAAATCAGATGCACTTAAACCAGGTGTT
AGCGAAATGGACTACTACCGTCTAATGTGAATCTCTTACAAGAAATCCAA
TCACTCAGTGATTTCCGATGATGCGATATTCCGATTCCACCAAGAACCTT
CAAATCTCATTGCAGCCAATATTACTGAAAGTGTTACCTAGTACTGCATG
TCATCAGGTTGCTCCACCACAAAATTTAAGACGCAGTTCAGCTAGCTGCC
CCTAGGACTCTCCCACCGTAACTCTTGAGGGTACGGAAAATTCAGCATTC
ATAGGATCGGAAGACGATAGTATAGTACCGTGTCGGTTC

FMO10652.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:40:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG10462-RE 3148 CG10462-RE 142..1352 6..1189 5095 96.2 Plus
CG10462-RA 3154 CG10462-RA 142..1352 6..1189 5095 96.2 Plus
CG10462-RD 3151 CG10462-RD 142..1349 6..1189 5060 96 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:40:23
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19734472..19734942 891..422 2290 99.6 Minus
2L 23513712 2L 19734998..19735224 424..198 1135 100 Minus
2L 23513712 2L 19735512..19735634 200..78 615 100 Minus
2L 23513712 2L 19735767..19735839 78..6 365 100 Minus
2L 23513712 2L 19734254..19734403 1043..901 335 90.7 Minus
Blast to na_te.dros performed on 2014-11-26 23:40:25 has no hits.

FMO10652.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:42:20 Download gff for FMO10652.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10462-RA 105..1157 1..1043 98 == Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:48:08 Download gff for FMO10652.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10462-RA 137..1189 1..1043 98 == Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:49:04 Download gff for FMO10652.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10462-RA 137..1189 1..1043 98 == Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:49:04 Download gff for FMO10652.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 19735000..19735221 201..422 100 <- Minus
2L 19735512..19735633 79..200 100 <- Minus
2L 19735767..19735842 1..78 96   Minus
2L 19734470..19734941 423..892 99 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:48:08 Download gff for FMO10652.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19734470..19734941 423..892 99 <- Minus
arm_2L 19735000..19735221 201..422 100 <- Minus
arm_2L 19735512..19735633 79..200 100 <- Minus
arm_2L 19735767..19735842 1..78 96   Minus