FMO10657.5prime Sequence
1111 bp (957 high quality bases) assembled on 2011-06-24
> FMO10657.5prime
CAGTCGACATGATGATGAACGCCTTCATTGACCCGGCTCAGCACCACCTG
GCCAGCTACGGGCTGCGAATGTCGCCCAACACCACCGCCAGTAACAGCAA
CGCGCAGCAGCAACAGCAGCAGCAACTGGAGATGACCCAACAGCAGCAGC
AACAACAGCAACAACAGCAGCAGCAACAGCAACAGGATCAGGAATCCGCG
GCGGCCACTGCTGCAGCCTATCAGAACTCCGGATATGGGCACTTTAACAG
CTATGCCTCCCGGGACTTTTTGCTGGGCAGGAGGGAGGCCGAGTACGGTG
TGGCAGGATCCGCCGGACAGGCCTCCGCCGCAGCGGATTCCATGCTCTTC
TCCGGCTTTCCCGCTCAGGCCGCGGAGCTGGGCTCCGGGTTCGGACAACA
CCCCTTCCACAGCCACCATCACCACCATCAGATGCGAATGGGCATGGCGG
ATGCCTACGCCGCCGGCCACCCGTACAACCACCACGGCAACTTCCCGACG
GCGGCAGTGCACCACCCGGTCGTGCACCACCCGTCCCACCACGCCATGTC
CGCGATGCACCCGGCCGGAGCAGGGGCCTTCCTGCGCTACATGCGCCATC
AGCCGGCCTCGTCCGCCTCCAGCGTTAAGCAGGAGATGCAGTGCCTCTGG
ATAGACCCCGACCAGCCGGGCCTGGTGCCCCCGGGCGGCAGGAAGACCTG
CAACAAGGTATTCCACTCGATGCACGAGATCGTCACCCACCTGACCGTGG
AGCACGTGGGCGGACCCGAGTGCACCACCCACGCCTGCTTCTGGGTGGGC
TGCTCTCGCAACGGACGCCCTTTCAGGGCCAAGTACAAGCTGGTCAACCA
CATCCGCGTCCACACCGGCGAGAACCTTTTCGCCTGCCCGCACCCGGGTT
GCGGCAAGTTTTCGCCGGAGCGAGAACCTCAGATCCACAATCGGACGCAT
ACAGGCGAGAGCCCTTCAGTGCAGCACGAGGCTGTGATCGCCGGCTCGCA
CTCCTCGATCGGAGAGCCACTCCCACGTCCACACGTCGACAGCCCTTAAT
TGCCGGATATGCTGTGAATAGTCTACCGCCATCCTCTCCTGCGGAGCCAT
GAAGGTGCCAT
FMO10657.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:36:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| opa-RA | 2939 | CG1133-RA | 293..1416 | 8..1108 | 4840 | 96.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:36:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 4853105..4854055 | 8..955 | 4515 | 99.1 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:36:27 has no hits.
FMO10657.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:41:47 Download gff for
FMO10657.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| opa-RA | 286..1357 | 1..1058 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:22:17 Download gff for
FMO10657.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| opa-RA | 286..1357 | 1..1058 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:47:29 Download gff for
FMO10657.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| opa-RA | 286..1357 | 1..1058 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:47:29 Download gff for
FMO10657.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 4853098..4854054 | 1..954 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:22:17 Download gff for
FMO10657.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 678820..679776 | 1..954 | 98 | -> | Plus |
