FMO10663.5prime Sequence
1116 bp (1004 high quality bases) assembled on 2011-06-24
> FMO10663.5prime
CAGTCGACATGCATCGATGCCGTTTTGGCATCACTAGCGACTGCGGATTT
GTGGTGTGGAAATTTCCGCAAAACAAAAATAAAAATAGACCTCGGTGTGC
CAACTTGCAAGCGATGCACAAAGGGGCGCCTCCTTGGCGAGTGGGCTGTG
CCGACGTGGCATCCGGAATGGAGTGGCAGCTGTCCGGGAATCCCGCATTG
GGAGAAGAGGAAGAGGCTGCAAACAAACAACAACAACAACAACTGATAAG
AAGTGAAAGGTGGGCCTGCAATCGCAGGACTATTCTCCTGGGATGCATCT
GCATCATTATCTTGATAGCTGTTCCCTCGAGCAATGCCACCCACATCAGC
GGACAATTCCAGACGGGCGACTTCTTTCAGTTCCTGGCGAAATTCGGCTT
CAACAAGGCAGATCTGACACGGCGCAATGCCTATGGATATATCTACGGCA
ATGTCACGTCGACGGATAAGTATGCGGTTCCTTTGACACTCGTCGTCTTG
GACAGAAGGACTTTCCTCGAGTTCTACGGCAACCGCAGTCAAAGGAGCCG
GGAAGCCGCCTGCACAGGGATGTTCTCCCGCCTCCAAAGGATCGCCTACG
ATTCCACGTGCAATCCTCGTGCCAAAAGGGACTTCCTGCGTCATGTTCCC
TGTCCCGTCAATCAGCTCTGCAGCGATGAAGATGAACCCGGAAACGTAGT
CCCGGGATCGCAGTTCACCTACGTTATCAACCTGAGGCGGAACCAAGATT
TTGGTACCTCTCCCTGTGGCCTGTTATCAAAACAAAAGCACCTGCCAGTG
GCACGCGCACGAGAGCCTGCCAAGGCTAAGTAAATTGGACAGCAATCTCC
TCAACACGCTGCACTACGACATACATCTGGTCAACTTGCATCCGACACTC
GGCCGCACATCACTTACCTACCAGTACTCGTACGATCAGCAGATCTACTG
AGATGTACTGTGTCCTGCTCGTCTACATTGTCTGCTGCCCATGCAAATTT
ATGCGTGCGGCGCGAAGCATCATGACAAGTTGTTACGTGAGTCTTCTCAG
CGAGTCGTCAGCTGCTCTGATCCCGCCACCTGATCATATGCCGCATGATG
GCGAGCCCGAATGCAG
FMO10663.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:41:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9304-RB | 2785 | CG9304-RB | 10..1109 | 9..1084 | 4900 | 97.8 | Plus |
| CG9304-RA | 2595 | CG9304-RA | 10..1109 | 9..1084 | 4900 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:41:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21973131..21973870 | 9..747 | 3650 | 99.9 | Plus |
| 2R | 25286936 | 2R | 21974172..21974441 | 746..1005 | 895 | 94.8 | Plus |
Blast to na_te.dros performed 2014-11-26 23:41:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 7148..7208 | 200..260 | 125 | 67.2 | Plus |
FMO10663.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:42:25 Download gff for
FMO10663.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9304-RA | 1..1114 | 6..1091 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:52:15 Download gff for
FMO10663.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9304-RA | 10..1118 | 9..1091 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:49:15 Download gff for
FMO10663.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9304-RA | 10..1118 | 9..1091 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:49:15 Download gff for
FMO10663.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21973131..21973870 | 9..747 | 99 | -> | Plus |
| 2R | 21974174..21974542 | 748..1091 | 93 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:52:15 Download gff for
FMO10663.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17860636..17861375 | 9..747 | 99 | -> | Plus |
| arm_2R | 17861679..17862047 | 748..1091 | 93 | | Plus |
